RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 LGALS3P17931 250 aaKnown RBP12.89□□□□□ -0.35
SMPD3-211ENST00000568373 H3BUT2 72 aa12.88□□□□□ -0.35
SMPD3-211ENST00000568373 NTM-AS1Q6ZSK4 140 aa12.88□□□□□ -0.35
SMPD3-211ENST00000568373 K7ERJ3 54 aa12.87□□□□□ -0.35
SMPD3-211ENST00000568373 PCP4P48539 62 aa12.87□□□□□ -0.35
SMPD3-211ENST00000568373 TRGV4A0A0C4DH28 118 aa12.87□□□□□ -0.35
SMPD3-211ENST00000568373 A0A0J9YY99 117 aa12.87□□□□□ -0.35
SMPD3-211ENST00000568373 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
SMPD3-211ENST00000568373 DGAT2L7PQ6IED9 249 aa12.86□□□□□ -0.35
SMPD3-211ENST00000568373 FHL2Q14192 279 aa12.85□□□□□ -0.35
SMPD3-211ENST00000568373 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
SMPD3-211ENST00000568373 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
SMPD3-211ENST00000568373 X6R8D5 127 aa12.85□□□□□ -0.35
SMPD3-211ENST00000568373 IGHV3-64A0A075B6Q5 118 aa12.85□□□□□ -0.35
SMPD3-211ENST00000568373 LINC00694P0DN24 101 aa12.85□□□□□ -0.35
SMPD3-211ENST00000568373 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
SMPD3-211ENST00000568373 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 LOC100131303A0A0U1RQF7 123 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 SMIM9A6NGZ8 99 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 UBE2D1P51668 147 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMPD3-211ENST00000568373 SBSPONQ8IVN8 264 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 LINC00612Q8N6U2 182 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
SMPD3-211ENST00000568373 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 C12orf74Q32Q52 190 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 OR5A1Q8NGJ0 315 aa12.84□□□□□ -0.35
SMPD3-211ENST00000568373 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.36
SMPD3-211ENST00000568373 A0A1W2PPM0 123 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 A0A1B0GWB2 263 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 DEFB130BP0DP73 79 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 DEFB130AP0DP74 79 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 SAMD5Q5TGI4 173 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 GEMIN7Q9H840 131 aaKnown RBP12.82□□□□□ -0.36
SMPD3-211ENST00000568373 NBEAL2Q6ZNJ1 2754 aa12.82□□□□□ -0.36
SMPD3-211ENST00000568373 GAGE10A6NGK3 116 aa12.81□□□□□ -0.36
SMPD3-211ENST00000568373 SMAGPQ0VAQ4 97 aa12.81□□□□□ -0.36
SMPD3-211ENST00000568373 IGHV1-58A0A0C4DH39 117 aa12.81□□□□□ -0.36
SMPD3-211ENST00000568373 APOC4P55056 127 aa12.81□□□□□ -0.36
SMPD3-211ENST00000568373 TMEM243Q9BU79 118 aa12.81□□□□□ -0.36
SMPD3-211ENST00000568373 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 TMEM238LA0A1B0GVL6 79 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 A6NJY4 79 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 WIPF1O43516 503 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 TIRAPP58753 221 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 GTF2H5Q6ZYL4 71 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
SMPD3-211ENST00000568373 IGLV5-45A0A087WSX0 123 aa12.79□□□□□ -0.36
SMPD3-211ENST00000568373 K7EP34 96 aa12.79□□□□□ -0.36
SMPD3-211ENST00000568373 FABP2P12104 132 aa12.79□□□□□ -0.36
SMPD3-211ENST00000568373 VSIG2Q96IQ7 327 aa12.79□□□□□ -0.36
SMPD3-211ENST00000568373 UBE2L6O14933 153 aa12.78□□□□□ -0.36
SMPD3-211ENST00000568373 DEFB135Q30KP9 77 aa12.78□□□□□ -0.36
SMPD3-211ENST00000568373 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
SMPD3-211ENST00000568373 IGHV3-30P01768 117 aa12.77□□□□□ -0.36
SMPD3-211ENST00000568373 SPINK8P0C7L1 97 aa12.77□□□□□ -0.36
SMPD3-211ENST00000568373 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.36
SMPD3-211ENST00000568373 C10orf126Q8N4M7 172 aa12.77□□□□□ -0.36
SMPD3-211ENST00000568373 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.36
SMPD3-211ENST00000568373 IGLL5B9A064 214 aa12.77□□□□□ -0.37
SMPD3-211ENST00000568373 H7C423 109 aa12.77□□□□□ -0.37
SMPD3-211ENST00000568373 RBX1P62877 108 aa12.77□□□□□ -0.37
SMPD3-211ENST00000568373 FAM19A3Q7Z5A8 133 aa12.77□□□□□ -0.37
SMPD3-211ENST00000568373 HERVK_113P63121 156 aa12.76□□□□□ -0.37
SMPD3-211ENST00000568373 LINC00242Q5T6M2 205 aa12.76□□□□□ -0.37
SMPD3-211ENST00000568373 SPCS1Q9Y6A9 102 aa12.76□□□□□ -0.37
SMPD3-211ENST00000568373 LYRM9A8MSI8 78 aa12.76□□□□□ -0.37
SMPD3-211ENST00000568373 A0A0J9YXY3 114 aa12.75□□□□□ -0.37
SMPD3-211ENST00000568373 COX6A2Q02221 97 aa12.75□□□□□ -0.37
SMPD3-211ENST00000568373 FAM222AQ5U5X8 452 aa12.75□□□□□ -0.37
SMPD3-211ENST00000568373 TMEM101Q96IK0 257 aa12.75□□□□□ -0.37
SMPD3-211ENST00000568373 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
SMPD3-211ENST00000568373 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
SMPD3-211ENST00000568373 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
SMPD3-211ENST00000568373 TMEM238C9JI98 176 aa12.73□□□□□ -0.37
SMPD3-211ENST00000568373 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
SMPD3-211ENST00000568373 A8MZ25 164 aa12.73□□□□□ -0.37
SMPD3-211ENST00000568373 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
SMPD3-211ENST00000568373 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
SMPD3-211ENST00000568373 PRO0255Q9UI72 69 aa12.72□□□□□ -0.37
SMPD3-211ENST00000568373 IGHV4-28A0A0C4DH34 117 aa12.71□□□□□ -0.37
SMPD3-211ENST00000568373 GYPEP15421 78 aa12.71□□□□□ -0.37
SMPD3-211ENST00000568373 IGHV4-30-4P0DP06 118 aa12.71□□□□□ -0.38
SMPD3-211ENST00000568373 GAGE6Q13070 117 aa12.71□□□□□ -0.38
SMPD3-211ENST00000568373 STAB1Q9NY15 2570 aa12.7□□□□□ -0.38
SMPD3-211ENST00000568373 DEFB4AO15263 64 aa12.7□□□□□ -0.38
SMPD3-211ENST00000568373 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
SMPD3-211ENST00000568373 IGLV5-39A0A0G2JS06 123 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 APOMO95445 188 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 LITAFQ99732 161 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 CHCHD5Q9BSY4 110 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 MIFP14174 115 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 Q8NAQ8 132 aa12.69□□□□□ -0.38
SMPD3-211ENST00000568373 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
SMPD3-211ENST00000568373 CFC1P0CG37 223 aa12.68□□□□□ -0.38
SMPD3-211ENST00000568373 RPL24P83731 157 aaKnown RBP12.68□□□□□ -0.38
SMPD3-211ENST00000568373 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms