RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 Q6Q795 121 aa10.03□□□□□ -0.8
UBFD1-207ENST00000567212 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
UBFD1-207ENST00000567212 TMEM256-PLSCR3K7ERE1 68 aa10.02□□□□□ -0.8
UBFD1-207ENST00000567212 LRRK2Q5S007 2527 aa10.02□□□□□ -0.81
UBFD1-207ENST00000567212 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
UBFD1-207ENST00000567212 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
UBFD1-207ENST00000567212 SMAD5-AS1Q9Y6J3 95 aa10.02□□□□□ -0.81
UBFD1-207ENST00000567212 UBE2D3P61077 147 aa10.02□□□□□ -0.81
UBFD1-207ENST00000567212 UBE2D2P62837 147 aa10.02□□□□□ -0.81
UBFD1-207ENST00000567212 PROK1P58294 105 aa10.01□□□□□ -0.81
UBFD1-207ENST00000567212 POLQO75417 2590 aa10.01□□□□□ -0.81
UBFD1-207ENST00000567212 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
UBFD1-207ENST00000567212 NDUFS5O43920 106 aa10□□□□□ -0.81
UBFD1-207ENST00000567212 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
UBFD1-207ENST00000567212 CMC4P56277 68 aaPredicted RBP10□□□□□ -0.81
UBFD1-207ENST00000567212 CENPEQ02224 2701 aa10□□□□□ -0.81
UBFD1-207ENST00000567212 LTBP2Q14767 1821 aa10□□□□□ -0.81
UBFD1-207ENST00000567212 POM121L12Q8N7R1 296 aa9.99□□□□□ -0.81
UBFD1-207ENST00000567212 FUSP35637 526 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBFD1-207ENST00000567212 C20orf173Q96LM9 149 aa9.99□□□□□ -0.81
UBFD1-207ENST00000567212 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
UBFD1-207ENST00000567212 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
UBFD1-207ENST00000567212 LINC01619G3V211 115 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 MSMBP08118 114 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 SLURP1P55000 103 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 PRR9Q5T870 116 aa9.98□□□□□ -0.81
UBFD1-207ENST00000567212 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 ZFAND2AQ8N6M9 145 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 ABCA12Q86UK0 2595 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 IGHV4-59P01825 116 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 C22orf34Q6ZV56 151 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 SEM1Q6ZVN7 128 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 CXCL5P42830 114 aa9.97□□□□□ -0.81
UBFD1-207ENST00000567212 K7EQD1 137 aa9.96□□□□□ -0.82
UBFD1-207ENST00000567212 M0QY20 66 aa9.96□□□□□ -0.82
UBFD1-207ENST00000567212 MP68P56378 58 aa9.96□□□□□ -0.82
UBFD1-207ENST00000567212 EPG5Q9HCE0 2579 aa9.96□□□□□ -0.82
UBFD1-207ENST00000567212 PTPRSQ13332 1948 aa9.96□□□□□ -0.82
UBFD1-207ENST00000567212 ZMAT4Q9H898 229 aa9.95□□□□□ -0.82
UBFD1-207ENST00000567212 KIAA1549LQ6ZVL6 1849 aa9.95□□□□□ -0.82
UBFD1-207ENST00000567212 NRGNQ92686 78 aa9.95□□□□□ -0.82
UBFD1-207ENST00000567212 REV3LO60673 3130 aa9.95□□□□□ -0.82
UBFD1-207ENST00000567212 SIRPDQ9H106 197 aa9.95□□□□□ -0.82
UBFD1-207ENST00000567212 SPTBN5Q9NRC6 3674 aaKnown RBP9.95□□□□□ -0.82
UBFD1-207ENST00000567212 GYPEP15421 78 aa9.95□□□□□ -0.82
UBFD1-207ENST00000567212 PRM2P04554 102 aa9.94□□□□□ -0.82
UBFD1-207ENST00000567212 BPY2O14599 106 aa9.94□□□□□ -0.82
UBFD1-207ENST00000567212 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
UBFD1-207ENST00000567212 NBEAQ8NFP9 2946 aa9.94□□□□□ -0.82
UBFD1-207ENST00000567212 ZFP36P26651 326 aaKnown RBP9.94□□□□□ -0.82
UBFD1-207ENST00000567212 DSPP15924 2871 aaKnown RBP9.93□□□□□ -0.82
UBFD1-207ENST00000567212 A0A0J9YX75 114 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 GNLYP22749 145 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 MTORP42345 2549 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
UBFD1-207ENST00000567212 C5orf56Q8N8D9 126 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 FRYQ5TBA9 3013 aa9.93□□□□□ -0.82
UBFD1-207ENST00000567212 IGHV4OR15-8A0A075B7B6 117 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 A0A087WW49 117 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 ELANEP08246 267 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 FASNP49327 2511 aaKnown RBP9.92□□□□□ -0.82
UBFD1-207ENST00000567212 UBE2BP63146 152 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
UBFD1-207ENST00000567212 POLR2KP53803 58 aaKnown RBP9.92□□□□□ -0.82
UBFD1-207ENST00000567212 SMIM26A0A096LP01 95 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 ATG2AQ2TAZ0 1938 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 C6orf99Q4VX62 202 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 ADAMTSL4-AS1Q5T5F5 129 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 A0A1W2PNU3 283 aaPredicted RBP9.91□□□□□ -0.82
UBFD1-207ENST00000567212 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 C4orf26Q17RF5 130 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 PRO0461Q9UI25 63 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 NDUFA1O15239 70 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
UBFD1-207ENST00000567212 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.82
UBFD1-207ENST00000567212 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
UBFD1-207ENST00000567212 TSHBP01222 138 aa9.9□□□□□ -0.83
UBFD1-207ENST00000567212 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.83
UBFD1-207ENST00000567212 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
UBFD1-207ENST00000567212 KIR2DL5BQ8NHK3 375 aa9.89□□□□□ -0.83
UBFD1-207ENST00000567212 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
UBFD1-207ENST00000567212 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
UBFD1-207ENST00000567212 BOD1L1Q8NFC6 3051 aa9.88□□□□□ -0.83
UBFD1-207ENST00000567212 Q6ZTI0 123 aa9.88□□□□□ -0.83
UBFD1-207ENST00000567212 RETNQ9HD89 108 aa9.88□□□□□ -0.83
UBFD1-207ENST00000567212 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
UBFD1-207ENST00000567212 ETDCA0A1B0GVM5 59 aa9.88□□□□□ -0.83
UBFD1-207ENST00000567212 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
UBFD1-207ENST00000567212 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
UBFD1-207ENST00000567212 DSCR9P59020 149 aa9.87□□□□□ -0.83
UBFD1-207ENST00000567212 ATP5EP2Q5VTU8 51 aa9.87□□□□□ -0.83
UBFD1-207ENST00000567212 C3orf84H3BNL1 204 aa9.87□□□□□ -0.83
UBFD1-207ENST00000567212 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms