RNA–Protein interactions for RNA: ENST00000566685.1

GGA2-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 4

Gene GGA2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-208ENST00000566685 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
GGA2-208ENST00000566685 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
GGA2-208ENST00000566685 RAB5AP20339 215 aa10.79□□□□□ -0.68
GGA2-208ENST00000566685 KRTAP10-1P60331 282 aa10.79□□□□□ -0.68
GGA2-208ENST00000566685 ZNF664Q8N3J9 261 aa10.78□□□□□ -0.68
GGA2-208ENST00000566685 MAP1LC3AQ9H492 121 aa10.78□□□□□ -0.68
GGA2-208ENST00000566685 RPS10P5Q9NQ39 176 aa10.78□□□□□ -0.68
GGA2-208ENST00000566685 CDC42SE2Q9NRR3 84 aa10.78□□□□□ -0.68
GGA2-208ENST00000566685 DYNC1H1Q14204 4646 aaKnown RBP10.78□□□□□ -0.68
GGA2-208ENST00000566685 PRSS47A8MTI9 375 aa10.77□□□□□ -0.69
GGA2-208ENST00000566685 SS18Q15532 418 aa10.77□□□□□ -0.69
GGA2-208ENST00000566685 COX19Q49B96 90 aa10.77□□□□□ -0.69
GGA2-208ENST00000566685 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
GGA2-208ENST00000566685 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
GGA2-208ENST00000566685 TIMM21Q9BVV7 248 aa10.77□□□□□ -0.69
GGA2-208ENST00000566685 CCL25O15444 150 aa10.76□□□□□ -0.69
GGA2-208ENST00000566685 UBE2D4Q9Y2X8 147 aa10.76□□□□□ -0.69
GGA2-208ENST00000566685 KIAA1109Q2LD37 5005 aa10.75□□□□□ -0.69
GGA2-208ENST00000566685 GAGE12HA6NDE8 117 aa10.75□□□□□ -0.69
GGA2-208ENST00000566685 SNAPINO95295 136 aa10.75□□□□□ -0.69
GGA2-208ENST00000566685 APOC3P02656 99 aa10.75□□□□□ -0.69
GGA2-208ENST00000566685 SVBPQ8N300 66 aa10.75□□□□□ -0.69
GGA2-208ENST00000566685 LINC00959A0A1B0GUT2 108 aa10.74□□□□□ -0.69
GGA2-208ENST00000566685 PRSS1P07477 247 aa10.74□□□□□ -0.69
GGA2-208ENST00000566685 GNB1LQ9BYB4 327 aa10.74□□□□□ -0.69
GGA2-208ENST00000566685 SPANXA1Q9NS26 97 aa10.74□□□□□ -0.69
GGA2-208ENST00000566685 AP5S1Q9NUS5 200 aa10.74□□□□□ -0.69
GGA2-208ENST00000566685 LOC389332A0A1B0GUA5 103 aa10.73□□□□□ -0.69
GGA2-208ENST00000566685 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
GGA2-208ENST00000566685 C1orf196B1AJZ1 125 aa10.73□□□□□ -0.69
GGA2-208ENST00000566685 K7EMI3 77 aa10.73□□□□□ -0.69
GGA2-208ENST00000566685 Q8N8P6 123 aa10.73□□□□□ -0.69
GGA2-208ENST00000566685 MT-ND6P03923 174 aa10.72□□□□□ -0.69
GGA2-208ENST00000566685 XCL1P47992 114 aa10.72□□□□□ -0.69
GGA2-208ENST00000566685 NXT2Q9NPJ8 142 aaKnown RBP10.72□□□□□ -0.69
GGA2-208ENST00000566685 G0S2P27469 103 aa10.71□□□□□ -0.69
GGA2-208ENST00000566685 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
GGA2-208ENST00000566685 ORMDL2Q53FV1 153 aa10.71□□□□□ -0.69
GGA2-208ENST00000566685 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
GGA2-208ENST00000566685 IFI27P40305 119 aaPredicted RBP10.7□□□□□ -0.7
GGA2-208ENST00000566685 XGP55808 180 aa10.7□□□□□ -0.7
GGA2-208ENST00000566685 CD164L2Q6UWJ8 174 aa10.7□□□□□ -0.7
GGA2-208ENST00000566685 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
GGA2-208ENST00000566685 MRPS36P82909 103 aaKnown RBP10.69□□□□□ -0.7
GGA2-208ENST00000566685 FOXI1Q12951 378 aa10.69□□□□□ -0.7
GGA2-208ENST00000566685 Q8N1X5 172 aa10.69□□□□□ -0.7
GGA2-208ENST00000566685 LRP1BQ9NZR2 4599 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 Q6ZUT4 128 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 C9orf163Q8N9P6 203 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 CYSLTR1Q9Y271 337 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 PYGO1Q9Y3Y4 419 aa10.68□□□□□ -0.7
GGA2-208ENST00000566685 LINC01620Q4KN68 170 aa10.67□□□□□ -0.7
GGA2-208ENST00000566685 RNASE13Q5GAN3 156 aaKnown RBP10.67□□□□□ -0.7
GGA2-208ENST00000566685 Q6ZSA8 131 aa10.67□□□□□ -0.7
GGA2-208ENST00000566685 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
GGA2-208ENST00000566685 IGHV1-58A0A0C4DH39 117 aa10.66□□□□□ -0.7
GGA2-208ENST00000566685 FABP9Q0Z7S8 132 aa10.66□□□□□ -0.7
GGA2-208ENST00000566685 C15orf56Q8N910 161 aa10.66□□□□□ -0.7
GGA2-208ENST00000566685 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
GGA2-208ENST00000566685 MRPL18Q9H0U6 180 aaKnown RBP10.66□□□□□ -0.7
GGA2-208ENST00000566685 HERC2O95714 4834 aa10.66□□□□□ -0.7
GGA2-208ENST00000566685 COX7A2LO14548 114 aa10.65□□□□□ -0.7
GGA2-208ENST00000566685 MALP21145 153 aa10.65□□□□□ -0.7
GGA2-208ENST00000566685 C2orf66Q6UXQ4 117 aa10.65□□□□□ -0.7
GGA2-208ENST00000566685 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
GGA2-208ENST00000566685 DNAH5Q8TE73 4624 aa10.64□□□□□ -0.71
GGA2-208ENST00000566685 IFITM10A6NMD0 228 aa10.64□□□□□ -0.71
GGA2-208ENST00000566685 NPSP0C0P6 89 aa10.64□□□□□ -0.71
GGA2-208ENST00000566685 Q6ZN92 141 aa10.64□□□□□ -0.71
GGA2-208ENST00000566685 TMEM141Q96I45 108 aa10.64□□□□□ -0.71
GGA2-208ENST00000566685 ALKBH7Q9BT30 221 aaPredicted RBP10.64□□□□□ -0.71
GGA2-208ENST00000566685 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
GGA2-208ENST00000566685 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
GGA2-208ENST00000566685 APOMO95445 188 aa10.63□□□□□ -0.71
GGA2-208ENST00000566685 HIGD2BQ4VC39 106 aa10.63□□□□□ -0.71
GGA2-208ENST00000566685 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
GGA2-208ENST00000566685 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
GGA2-208ENST00000566685 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
GGA2-208ENST00000566685 LINC01549A6NIU2 74 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 EPM2AB3EWF7 344 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 ZNF561-AS1K7EIQ3 104 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 FAM104AQ969W3 186 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 C2orf88Q9BSF0 95 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 CHAC1Q9BUX1 264 aa10.62□□□□□ -0.71
GGA2-208ENST00000566685 IGLV4-3A0A075B6K6 122 aa10.61□□□□□ -0.71
GGA2-208ENST00000566685 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
GGA2-208ENST00000566685 VCX2Q9H322 139 aa10.61□□□□□ -0.71
GGA2-208ENST00000566685 RYR1P21817 5038 aa10.61□□□□□ -0.71
GGA2-208ENST00000566685 SLPIP03973 132 aa10.6□□□□□ -0.71
GGA2-208ENST00000566685 SDIM1Q6ZPB5 146 aa10.6□□□□□ -0.71
GGA2-208ENST00000566685 FA2HQ7L5A8 372 aa10.6□□□□□ -0.71
GGA2-208ENST00000566685 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
GGA2-208ENST00000566685 PKIGQ9Y2B9 76 aa10.6□□□□□ -0.71
GGA2-208ENST00000566685 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
GGA2-208ENST00000566685 HAMPP81172 84 aa10.59□□□□□ -0.71
GGA2-208ENST00000566685 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
GGA2-208ENST00000566685 TOMM6Q96B49 74 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms