RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CLEC2BQ92478 149 aa10.3□□□□□ -0.76
CDH1-209ENST00000566510 ZNF469Q96JG9 3925 aaPredicted RBP10.29□□□□□ -0.76
CDH1-209ENST00000566510 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
CDH1-209ENST00000566510 C2orf82Q6UX34 121 aa10.29□□□□□ -0.76
CDH1-209ENST00000566510 A0A1W2PRX2 142 aa10.29□□□□□ -0.76
CDH1-209ENST00000566510 DEFB114Q30KQ6 69 aa10.29□□□□□ -0.76
CDH1-209ENST00000566510 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
CDH1-209ENST00000566510 C4orf3Q8WVX3 66 aa10.29□□□□□ -0.76
CDH1-209ENST00000566510 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 A8MTW9 85 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 COX6A2Q02221 97 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 DNAJC30Q96LL9 226 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 NDUFA7O95182 113 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 FSHBP01225 129 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 RPL13AP40429 203 aaKnown RBP10.28□□□□□ -0.76
CDH1-209ENST00000566510 KRTAP10-9P60411 292 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 STHQ8IWL8 128 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.28□□□□□ -0.76
CDH1-209ENST00000566510 YAE1D1Q9NRH1 226 aa10.28□□□□□ -0.76
CDH1-209ENST00000566510 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.76
CDH1-209ENST00000566510 TRAV26-1A0A087WT03 109 aa10.27□□□□□ -0.77
CDH1-209ENST00000566510 TRAV13-1A0A0B4J241 112 aa10.27□□□□□ -0.77
CDH1-209ENST00000566510 TEX29Q8N6K0 151 aa10.27□□□□□ -0.77
CDH1-209ENST00000566510 RS1O15537 224 aa10.26□□□□□ -0.77
CDH1-209ENST00000566510 CIRBPQ14011 172 aaKnown RBP10.26□□□□□ -0.77
CDH1-209ENST00000566510 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
CDH1-209ENST00000566510 Q9H8V8 135 aa10.26□□□□□ -0.77
CDH1-209ENST00000566510 M0QXV9 152 aa10.26□□□□□ -0.77
CDH1-209ENST00000566510 SNCGO76070 127 aa10.26□□□□□ -0.77
CDH1-209ENST00000566510 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
CDH1-209ENST00000566510 H7C423 109 aa10.25□□□□□ -0.77
CDH1-209ENST00000566510 LINC00694P0DN24 101 aa10.25□□□□□ -0.77
CDH1-209ENST00000566510 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
CDH1-209ENST00000566510 TRAV8-4A0A0B4J246 113 aa10.25□□□□□ -0.77
CDH1-209ENST00000566510 NDUFA1O15239 70 aa10.24□□□□□ -0.77
CDH1-209ENST00000566510 ODF3L2Q3SX64 289 aa10.24□□□□□ -0.77
CDH1-209ENST00000566510 Q96MF0 132 aa10.24□□□□□ -0.77
CDH1-209ENST00000566510 ANAPC13Q9BS18 74 aa10.24□□□□□ -0.77
CDH1-209ENST00000566510 TIRAPP58753 221 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 HERVK_113P63121 156 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 LINC00242Q5T6M2 205 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 Q6ZTI0 123 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 C1orf158Q8N1D5 194 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 Q8N2B8 174 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 RNF183Q96D59 192 aa10.23□□□□□ -0.77
CDH1-209ENST00000566510 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 CRLF1O75462 422 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 IFITM1P13164 125 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 RPL36AP83881 106 aaKnown RBP10.22□□□□□ -0.77
CDH1-209ENST00000566510 RPL36ALQ969Q0 106 aaKnown RBP10.22□□□□□ -0.77
CDH1-209ENST00000566510 GAGE12JA6NER3 117 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 GAGE4Q13068 117 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 GAGE5Q13069 117 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 MEIG1Q5JSS6 88 aa10.22□□□□□ -0.77
CDH1-209ENST00000566510 TIMM17BO60830 172 aa10.21□□□□□ -0.77
CDH1-209ENST00000566510 GAGE2BQ13066 116 aa10.21□□□□□ -0.77
CDH1-209ENST00000566510 GAGE2EQ4V326 116 aa10.21□□□□□ -0.77
CDH1-209ENST00000566510 GAGE2DQ9UEU5 116 aa10.21□□□□□ -0.77
CDH1-209ENST00000566510 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.78
CDH1-209ENST00000566510 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.78
CDH1-209ENST00000566510 ITPR3Q14573 2671 aa10.21□□□□□ -0.78
CDH1-209ENST00000566510 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.78
CDH1-209ENST00000566510 USP24Q9UPU5 2620 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 IGLV5-45A0A087WSX0 123 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 LST1O00453 97 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 CITED2Q99967 270 aaPredicted RBP10.2□□□□□ -0.78
CDH1-209ENST00000566510 DEFB113Q30KQ7 82 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 K7EQD1 137 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 CLUHP3Q96NS8 147 aa10.2□□□□□ -0.78
CDH1-209ENST00000566510 NOP10Q9NPE3 64 aaKnown RBP10.2□□□□□ -0.78
CDH1-209ENST00000566510 APCP25054 2843 aa10.19□□□□□ -0.78
CDH1-209ENST00000566510 CITED1Q99966 193 aa10.19□□□□□ -0.78
CDH1-209ENST00000566510 H3BT86 120 aa10.19□□□□□ -0.78
CDH1-209ENST00000566510 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
CDH1-209ENST00000566510 SMIM1B2RUZ4 78 aa10.18□□□□□ -0.78
CDH1-209ENST00000566510 UBE2L6O14933 153 aa10.18□□□□□ -0.78
CDH1-209ENST00000566510 FLNAP21333 2647 aaKnown RBP10.18□□□□□ -0.78
CDH1-209ENST00000566510 IGKV3OR2-268A0A0C4DH90 116 aa10.18□□□□□ -0.78
CDH1-209ENST00000566510 IGLV5-39A0A0G2JS06 123 aa10.18□□□□□ -0.78
CDH1-209ENST00000566510 CCL24O00175 119 aa10.17□□□□□ -0.78
CDH1-209ENST00000566510 DAZ2Q13117 558 aaKnown RBP10.17□□□□□ -0.78
CDH1-209ENST00000566510 TTC32Q5I0X7 151 aa10.17□□□□□ -0.78
CDH1-209ENST00000566510 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
CDH1-209ENST00000566510 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
CDH1-209ENST00000566510 UBR5O95071 2799 aaPredicted RBP10.17□□□□□ -0.78
CDH1-209ENST00000566510 TRGV2A0A075B6R0 118 aa10.16□□□□□ -0.78
CDH1-209ENST00000566510 NBPF19A0A087WUL8 3843 aa10.16□□□□□ -0.78
CDH1-209ENST00000566510 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
CDH1-209ENST00000566510 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
CDH1-209ENST00000566510 MTORP42345 2549 aa10.16□□□□□ -0.78
CDH1-209ENST00000566510 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 GAGE7O76087 117 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
CDH1-209ENST00000566510 ACANP16112 2415 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms