RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
ABCA3-204ENST00000566200 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
ABCA3-204ENST00000566200 POLR2KP53803 58 aaKnown RBP11.68□□□□□ -0.54
ABCA3-204ENST00000566200 KRTAP10-8P60410 259 aa11.68□□□□□ -0.54
ABCA3-204ENST00000566200 CT83Q5H943 113 aa11.68□□□□□ -0.54
ABCA3-204ENST00000566200 MRPL52Q86TS9 123 aaKnown RBP11.68□□□□□ -0.54
ABCA3-204ENST00000566200 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
ABCA3-204ENST00000566200 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
ABCA3-204ENST00000566200 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
ABCA3-204ENST00000566200 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
ABCA3-204ENST00000566200 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
ABCA3-204ENST00000566200 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
ABCA3-204ENST00000566200 TRBV27A0A0K0K1C4 114 aa11.66□□□□□ -0.54
ABCA3-204ENST00000566200 SYCNQ0VAF6 134 aa11.66□□□□□ -0.54
ABCA3-204ENST00000566200 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
ABCA3-204ENST00000566200 RAB4AP20338 218 aa11.65□□□□□ -0.54
ABCA3-204ENST00000566200 SS18Q15532 418 aa11.65□□□□□ -0.54
ABCA3-204ENST00000566200 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
ABCA3-204ENST00000566200 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 CEBPGP53567 150 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 ALKAL2Q6UX46 152 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 FAM210AQ96ND0 272 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
ABCA3-204ENST00000566200 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 ZNF561-AS1K7EIQ3 104 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 CAMPP49913 170 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 PTTG1IPP53801 180 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
ABCA3-204ENST00000566200 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
ABCA3-204ENST00000566200 SMKR1H3BMG3 65 aa11.62□□□□□ -0.55
ABCA3-204ENST00000566200 Q6ZRP5 223 aa11.62□□□□□ -0.55
ABCA3-204ENST00000566200 A0A1W2PNN7 141 aa11.61□□□□□ -0.55
ABCA3-204ENST00000566200 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
ABCA3-204ENST00000566200 REG3GQ6UW15 175 aa11.61□□□□□ -0.55
ABCA3-204ENST00000566200 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
ABCA3-204ENST00000566200 NRACQ8N912 160 aa11.6□□□□□ -0.55
ABCA3-204ENST00000566200 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
ABCA3-204ENST00000566200 SMIM7Q9BQ49 75 aa11.6□□□□□ -0.55
ABCA3-204ENST00000566200 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
ABCA3-204ENST00000566200 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
ABCA3-204ENST00000566200 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
ABCA3-204ENST00000566200 GAGE2BQ13066 116 aa11.59□□□□□ -0.55
ABCA3-204ENST00000566200 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
ABCA3-204ENST00000566200 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
ABCA3-204ENST00000566200 COX7A2LO14548 114 aa11.58□□□□□ -0.56
ABCA3-204ENST00000566200 VCYO14598 125 aa11.58□□□□□ -0.56
ABCA3-204ENST00000566200 V9GYV3 84 aa11.58□□□□□ -0.56
ABCA3-204ENST00000566200 MALP21145 153 aa11.57□□□□□ -0.56
ABCA3-204ENST00000566200 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
ABCA3-204ENST00000566200 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
ABCA3-204ENST00000566200 SRP19P09132 144 aaKnown RBP11.56□□□□□ -0.56
ABCA3-204ENST00000566200 FCER1GP30273 86 aa11.56□□□□□ -0.56
ABCA3-204ENST00000566200 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
ABCA3-204ENST00000566200 Q6ZUT4 128 aa11.56□□□□□ -0.56
ABCA3-204ENST00000566200 ISOC2Q96AB3 205 aa11.56□□□□□ -0.56
ABCA3-204ENST00000566200 EIF5A2Q9GZV4 153 aaKnown RBP11.56□□□□□ -0.56
ABCA3-204ENST00000566200 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
ABCA3-204ENST00000566200 APOMO95445 188 aa11.55□□□□□ -0.56
ABCA3-204ENST00000566200 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
ABCA3-204ENST00000566200 CAMK2N2Q96S95 79 aa11.55□□□□□ -0.56
ABCA3-204ENST00000566200 RIGQ13278 110 aa11.54□□□□□ -0.56
ABCA3-204ENST00000566200 C9orf116Q5BN46 136 aaPredicted RBP11.54□□□□□ -0.56
ABCA3-204ENST00000566200 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
ABCA3-204ENST00000566200 C2orf48Q96LS8 159 aa11.54□□□□□ -0.56
ABCA3-204ENST00000566200 PSORS1C2Q9UIG4 136 aa11.54□□□□□ -0.56
ABCA3-204ENST00000566200 AKAP14Q86UN6 197 aa11.53□□□□□ -0.56
ABCA3-204ENST00000566200 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
ABCA3-204ENST00000566200 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
ABCA3-204ENST00000566200 OPRPNQ99935 248 aaPredicted RBP11.52□□□□□ -0.57
ABCA3-204ENST00000566200 TIMM21Q9BVV7 248 aa11.52□□□□□ -0.57
ABCA3-204ENST00000566200 PPP1R17O96001 155 aa11.51□□□□□ -0.57
ABCA3-204ENST00000566200 FAM104BQ5XKR9 115 aa11.51□□□□□ -0.57
ABCA3-204ENST00000566200 PHF5AQ7RTV0 110 aaKnown RBP11.51□□□□□ -0.57
ABCA3-204ENST00000566200 LPAP08519 4548 aa11.5□□□□□ -0.57
ABCA3-204ENST00000566200 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
ABCA3-204ENST00000566200 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
ABCA3-204ENST00000566200 PPP1R2P9O14990 202 aa11.49□□□□□ -0.57
ABCA3-204ENST00000566200 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
ABCA3-204ENST00000566200 SMAGPQ0VAQ4 97 aa11.49□□□□□ -0.57
ABCA3-204ENST00000566200 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
ABCA3-204ENST00000566200 MT-ND6P03923 174 aa11.48□□□□□ -0.57
ABCA3-204ENST00000566200 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
ABCA3-204ENST00000566200 RNF151Q2KHN1 245 aa11.48□□□□□ -0.57
ABCA3-204ENST00000566200 hCG_2014768A0A024R1R8 64 aa11.47□□□□□ -0.57
ABCA3-204ENST00000566200 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
ABCA3-204ENST00000566200 FAM74A3Q4VXF1 159 aa11.47□□□□□ -0.57
ABCA3-204ENST00000566200 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
ABCA3-204ENST00000566200 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
ABCA3-204ENST00000566200 C20orf78Q9BR46 151 aa11.47□□□□□ -0.57
ABCA3-204ENST00000566200 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.57
ABCA3-204ENST00000566200 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
ABCA3-204ENST00000566200 C9JQL5 133 aa11.46□□□□□ -0.57
ABCA3-204ENST00000566200 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
ABCA3-204ENST00000566200 TMEM241Q24JQ0 296 aa11.46□□□□□ -0.57
ABCA3-204ENST00000566200 C1orf137Q5JT78 98 aa11.46□□□□□ -0.57
ABCA3-204ENST00000566200 C10orf25Q5T742 122 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms