RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
USB1-210ENST00000565151 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
USB1-210ENST00000565151 OR5A1Q8NGJ0 315 aa9.31□□□□□ -0.92
USB1-210ENST00000565151 PRSS3P2Q8NHM4 247 aa9.31□□□□□ -0.92
USB1-210ENST00000565151 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
USB1-210ENST00000565151 COX6A2Q02221 97 aa9.3□□□□□ -0.92
USB1-210ENST00000565151 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
USB1-210ENST00000565151 CDC42SE2Q9NRR3 84 aa9.3□□□□□ -0.92
USB1-210ENST00000565151 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
USB1-210ENST00000565151 GVQW2A0A096LPI5 108 aaPredicted RBP9.29□□□□□ -0.92
USB1-210ENST00000565151 ZNF25P17030 456 aaPredicted RBP9.29□□□□□ -0.92
USB1-210ENST00000565151 MRPL52Q86TS9 123 aaKnown RBP9.29□□□□□ -0.92
USB1-210ENST00000565151 MRAP2Q96G30 205 aa9.29□□□□□ -0.92
USB1-210ENST00000565151 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
USB1-210ENST00000565151 CCL25O15444 150 aa9.28□□□□□ -0.92
USB1-210ENST00000565151 OXTP01178 125 aa9.28□□□□□ -0.92
USB1-210ENST00000565151 XCL1P47992 114 aa9.28□□□□□ -0.92
USB1-210ENST00000565151 MRPL51Q4U2R6 128 aaKnown RBP9.28□□□□□ -0.92
USB1-210ENST00000565151 BORCS7Q96B45 105 aa9.28□□□□□ -0.92
USB1-210ENST00000565151 PLAC8Q9NZF1 115 aa9.28□□□□□ -0.92
USB1-210ENST00000565151 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.27□□□□□ -0.93
USB1-210ENST00000565151 SMIM27A0A1W2PRY6 76 aa9.27□□□□□ -0.93
USB1-210ENST00000565151 MT1HL1P0DM35 61 aa9.27□□□□□ -0.93
USB1-210ENST00000565151 RIGQ13278 110 aa9.27□□□□□ -0.93
USB1-210ENST00000565151 ADIRFQ15847 76 aa9.27□□□□□ -0.93
USB1-210ENST00000565151 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
USB1-210ENST00000565151 FAM104AQ969W3 186 aa9.27□□□□□ -0.93
USB1-210ENST00000565151 FAM104BQ5XKR9 115 aa9.26□□□□□ -0.93
USB1-210ENST00000565151 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
USB1-210ENST00000565151 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
USB1-210ENST00000565151 A0A096LNI7 61 aa9.25□□□□□ -0.93
USB1-210ENST00000565151 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
USB1-210ENST00000565151 ZNF664Q8N3J9 261 aa9.25□□□□□ -0.93
USB1-210ENST00000565151 NAT8BQ9UHF3 227 aa9.25□□□□□ -0.93
USB1-210ENST00000565151 UBE2D4Q9Y2X8 147 aa9.25□□□□□ -0.93
USB1-210ENST00000565151 IGKV2-24A0A0C4DH68 120 aa9.24□□□□□ -0.93
USB1-210ENST00000565151 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
USB1-210ENST00000565151 VCYO14598 125 aa9.24□□□□□ -0.93
USB1-210ENST00000565151 PHOX2AO14813 284 aa9.24□□□□□ -0.93
USB1-210ENST00000565151 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
USB1-210ENST00000565151 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
USB1-210ENST00000565151 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
USB1-210ENST00000565151 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
USB1-210ENST00000565151 CAMPP49913 170 aa9.23□□□□□ -0.93
USB1-210ENST00000565151 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 PEA15Q15121 130 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 MAJINQ3KP22 176 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 Q6ZUT4 128 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
USB1-210ENST00000565151 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
USB1-210ENST00000565151 RPL39P62891 51 aaKnown RBP9.21□□□□□ -0.94
USB1-210ENST00000565151 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
USB1-210ENST00000565151 CSDC2Q9Y534 153 aaKnown RBP9.21□□□□□ -0.94
USB1-210ENST00000565151 SS18Q15532 418 aa9.2□□□□□ -0.94
USB1-210ENST00000565151 STPG4Q8N801 248 aa9.2□□□□□ -0.94
USB1-210ENST00000565151 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
USB1-210ENST00000565151 NPYP01303 97 aa9.19□□□□□ -0.94
USB1-210ENST00000565151 FCER1GP30273 86 aa9.19□□□□□ -0.94
USB1-210ENST00000565151 OPRPNQ99935 248 aaPredicted RBP9.19□□□□□ -0.94
USB1-210ENST00000565151 SMDT1Q9H4I9 107 aa9.19□□□□□ -0.94
USB1-210ENST00000565151 IGLV4-69A0A075B6H9 119 aa9.18□□□□□ -0.94
USB1-210ENST00000565151 D6R8Y8 96 aa9.18□□□□□ -0.94
USB1-210ENST00000565151 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
USB1-210ENST00000565151 Q6ZRU5 148 aa9.18□□□□□ -0.94
USB1-210ENST00000565151 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
USB1-210ENST00000565151 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
USB1-210ENST00000565151 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
USB1-210ENST00000565151 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 LINC00862A6NCI5 91 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 C1orf196B1AJZ1 125 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 PPP1R2P9O14990 202 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 PPP1R17O96001 155 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 CKS2P33552 79 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
USB1-210ENST00000565151 TCAPO15273 167 aa9.16□□□□□ -0.94
USB1-210ENST00000565151 HBBP68871 147 aa9.16□□□□□ -0.94
USB1-210ENST00000565151 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
USB1-210ENST00000565151 SERTAD4-AS1Q5TG53 156 aa9.16□□□□□ -0.94
USB1-210ENST00000565151 A0A1B0GW15 77 aa9.15□□□□□ -0.94
USB1-210ENST00000565151 COX7A2LO14548 114 aa9.15□□□□□ -0.94
USB1-210ENST00000565151 ODF1Q14990 250 aa9.15□□□□□ -0.94
USB1-210ENST00000565151 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
USB1-210ENST00000565151 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
USB1-210ENST00000565151 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
USB1-210ENST00000565151 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
USB1-210ENST00000565151 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
USB1-210ENST00000565151 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.12□□□□□ -0.95
USB1-210ENST00000565151 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
USB1-210ENST00000565151 F8W036 122 aa9.11□□□□□ -0.95
USB1-210ENST00000565151 MALP21145 153 aa9.11□□□□□ -0.95
USB1-210ENST00000565151 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
USB1-210ENST00000565151 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
USB1-210ENST00000565151 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
USB1-210ENST00000565151 LRP2P98164 4655 aa9.11□□□□□ -0.95
USB1-210ENST00000565151 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms