RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 COX6A2Q02221 97 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 SPAG11BQ08648 103 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 COX17Q14061 63 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 SPAG11AQ6PDA7 123 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 MYOZ3Q8TDC0 251 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 CNFNQ9BYD5 112 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 LINC00472Q9H8W2 130 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 CDC42SE2Q9NRR3 84 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 LINC01558Q9Y6Z2 57 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 KDM3BQ7LBC6 1761 aa0.22□□□□□ -2.37
HMGB1P33-201ENST00000563485 SPHKAPQ2M3C7 1700 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM262E9PQX1 116 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 HMGN4O00479 90 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 CFAP126Q5VTH2 177 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 UBE2DNLQ8IWF7 75 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 SVBPQ8N300 66 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 TCEAL7Q9BRU2 100 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 LINC00474Q9P2X8 69 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 V9GYH0 126 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZFYVE26Q68DK2 2539 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 SCAPERQ9BY12 1400 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 NSD3Q9BZ95 1437 aa0.21□□□□□ -2.38
HMGB1P33-201ENST00000563485 RAPGEF6Q8TEU7 1601 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 WNK3Q9BYP7 1800 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 ARHGAP5Q13017 1502 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 GOLGA4Q13439 2230 aaKnown RBP0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 C20orf202A1L168 122 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 F8VRH5 84 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 SNAPC5O75971 98 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 UBE2D3P61077 147 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 UBE2D2P62837 147 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 HSD52Q0P140 79 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 BAGE2Q86Y30 109 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 C14orf144Q96I85 54 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 SPRR4Q96PI1 79 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 SHANK2Q9UPX8 1470 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 CSMD3Q7Z407 3707 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 PLXNB2O15031 1838 aa0.2□□□□□ -2.38
HMGB1P33-201ENST00000563485 HMGXB3Q12766 1538 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 KIF21AQ7Z4S6 1674 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 A0A0D9SFI3 127 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 IGLC7A0M8Q6 106 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 NAP1L6A6NFF2 107 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 APOC3P02656 99 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 S100A1P23297 94 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 GTF2H5Q6ZYL4 71 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 UQCR10Q9UDW1 63 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 PSME4Q14997 1843 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 VPS8Q8N3P4 1428 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 SYNE1Q8NF91 8797 aaKnown RBP0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 ARHGEF5Q12774 1597 aa0.19□□□□□ -2.38
HMGB1P33-201ENST00000563485 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 EHBP1L1Q8N3D4 1523 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZNF292O60281 2723 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 SBF2Q86WG5 1849 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 PLCE1Q9P212 2302 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 LAMC1P11047 1609 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 IGF2RP11717 2491 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TRAV22A0A0B4J277 110 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 CTXND1A0A1B0GTU2 59 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZNF815PA8K554 130 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 SFT2D2O95562 160 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 MGPP08493 103 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 COX6CP09669 75 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 SSBP3-AS1Q7Z2R9 100 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TSLPQ969D9 159 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 ANKRD17O75179 2603 aaKnown RBP0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 UNC79Q9P2D8 2635 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TCHHQ07283 1943 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 TET3O43151 1660 aa0.18□□□□□ -2.38
HMGB1P33-201ENST00000563485 MYO7BQ6PIF6 2116 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 BIVM-ERCC5R4GMW8 1640 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 TRAV30A0A087WSZ9 112 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 KRTDAPP60985 99 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 Q5BKY6 102 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM170BQ5T4T1 132 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 ACBD7Q8N6N7 88 aa0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM263Q8WUH6 116 aaKnown RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 NXT2Q9NPJ8 142 aaKnown RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 PRDM15P57071 1507 aaPredicted RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 HUWE1Q7Z6Z7 4374 aaKnown RBP0.17□□□□□ -2.38
HMGB1P33-201ENST00000563485 LRP6O75581 1613 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 GAPVD1Q14C86 1478 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 ZNF236Q9UL36 1845 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 TMEM218A2RU14 115 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 CHKB-CPT1BH3BT56 60 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 S100A3P33764 101 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 RBP2P50120 134 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 GNG11P61952 73 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 Q0VG73 95 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 C12orf57Q99622 126 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 LINC00846Q9NV44 126 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 PRO1854Q9UHT4 67 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 SPCS1Q9Y6A9 102 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 COL4A6Q14031 1691 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 TOPAZ1Q8N9V7 1692 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 KMT2AQ03164 3969 aa0.16□□□□□ -2.38
HMGB1P33-201ENST00000563485 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms