RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	NRAC	Q8N912	160 aa		13.97	□□□□□ -0.17
PPP4C-205	ENST00000563200	SMKR1	H3BMG3	65 aa		13.96	□□□□□ -0.18
PPP4C-205	ENST00000563200	OR5A1	Q8NGJ0	315 aa		13.95	□□□□□ -0.18
PPP4C-205	ENST00000563200	FAT3	Q8TDW7	4589 aa		13.95	□□□□□ -0.18
PPP4C-205	ENST00000563200	CIRBP	Q14011	172 aa	Known RBP	13.94	□□□□□ -0.18
PPP4C-205	ENST00000563200	FAM104B	Q5XKR9	115 aa		13.94	□□□□□ -0.18
PPP4C-205	ENST00000563200	MRPL52	Q86TS9	123 aa	Known RBP	13.94	□□□□□ -0.18
PPP4C-205	ENST00000563200	AP5S1	Q9NUS5	200 aa		13.94	□□□□□ -0.18
PPP4C-205	ENST00000563200	CFAP161	Q6P656	301 aa		13.93	□□□□□ -0.18
PPP4C-205	ENST00000563200	PKHD1L1	Q86WI1	4243 aa		13.93	□□□□□ -0.18
PPP4C-205	ENST00000563200	VCY	O14598	125 aa		13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	PPP1R17	O96001	155 aa		13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	FOXI1	Q12951	378 aa		13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	MRPL51	Q4U2R6	128 aa	Known RBP	13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	TMEM101	Q96IK0	257 aa		13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	BTF3L4	Q96K17	158 aa		13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	CDC42SE2	Q9NRR3	84 aa		13.92	□□□□□ -0.18
PPP4C-205	ENST00000563200	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.91	□□□□□ -0.18
PPP4C-205	ENST00000563200	C7orf77	A4D0Y5	90 aa		13.91	□□□□□ -0.18
PPP4C-205	ENST00000563200	SUMO2	P61956	95 aa	Known RBP	13.91	□□□□□ -0.18
PPP4C-205	ENST00000563200	IGHV3-64	A0A075B6Q5	118 aa		13.9	□□□□□ -0.18
PPP4C-205	ENST00000563200	LINC00959	A0A1B0GUT2	108 aa		13.9	□□□□□ -0.18
PPP4C-205	ENST00000563200	CAMP	P49913	170 aa		13.9	□□□□□ -0.18
PPP4C-205	ENST00000563200		A0A1B0GW15	77 aa		13.9	□□□□□ -0.19
PPP4C-205	ENST00000563200	TRBV24-1	A0A075B6N3	115 aa		13.89	□□□□□ -0.19
PPP4C-205	ENST00000563200	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP4C-205	ENST00000563200	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.88	□□□□□ -0.19
PPP4C-205	ENST00000563200	XCL1	P47992	114 aa		13.88	□□□□□ -0.19
PPP4C-205	ENST00000563200	HIGD2B	Q4VC39	106 aa		13.88	□□□□□ -0.19
PPP4C-205	ENST00000563200	ZNF664	Q8N3J9	261 aa		13.88	□□□□□ -0.19
PPP4C-205	ENST00000563200		A0A1B0GXF2	115 aa		13.87	□□□□□ -0.19
PPP4C-205	ENST00000563200	PPP1R2P9	O14990	202 aa		13.87	□□□□□ -0.19
PPP4C-205	ENST00000563200	CCL25	O15444	150 aa		13.87	□□□□□ -0.19
PPP4C-205	ENST00000563200	FCER1G	P30273	86 aa		13.87	□□□□□ -0.19
PPP4C-205	ENST00000563200	UQCC3	Q6UW78	93 aa		13.87	□□□□□ -0.19
PPP4C-205	ENST00000563200	CSDC2	Q9Y534	153 aa	Known RBP	13.87	□□□□□ -0.19
PPP4C-205	ENST00000563200	KIR2DL4	Q99706	377 aa		13.86	□□□□□ -0.19
PPP4C-205	ENST00000563200	C20orf78	Q9BR46	151 aa		13.86	□□□□□ -0.19
PPP4C-205	ENST00000563200	UBE2D4	Q9Y2X8	147 aa		13.86	□□□□□ -0.19
PPP4C-205	ENST00000563200	CHTF8	P0CG12	524 aa		13.85	□□□□□ -0.19
PPP4C-205	ENST00000563200	RPL32	P62910	135 aa	Known RBP	13.85	□□□□□ -0.19
PPP4C-205	ENST00000563200	MRPL54	Q6P161	138 aa	Known RBP	13.85	□□□□□ -0.19
PPP4C-205	ENST00000563200	SPACA4	Q8TDM5	124 aa		13.85	□□□□□ -0.19
PPP4C-205	ENST00000563200	CKS2	P33552	79 aa		13.84	□□□□□ -0.19
PPP4C-205	ENST00000563200	RPL37A	P61513	92 aa	Known RBP	13.84	□□□□□ -0.19
PPP4C-205	ENST00000563200	HBB	P68871	147 aa		13.84	□□□□□ -0.19
PPP4C-205	ENST00000563200	SS18	Q15532	418 aa		13.83	□□□□□ -0.2
PPP4C-205	ENST00000563200	CD164L2	Q6UWJ8	174 aa		13.83	□□□□□ -0.2
PPP4C-205	ENST00000563200		A0A087WYN8	130 aa		13.82	□□□□□ -0.2
PPP4C-205	ENST00000563200		J3QL48	77 aa		13.82	□□□□□ -0.2
PPP4C-205	ENST00000563200	TNFRSF6B	O95407	300 aa		13.82	□□□□□ -0.2
PPP4C-205	ENST00000563200	S100A8	P05109	93 aa		13.82	□□□□□ -0.2
PPP4C-205	ENST00000563200		D6R8Y8	96 aa		13.81	□□□□□ -0.2
PPP4C-205	ENST00000563200	COX6A2	Q02221	97 aa		13.81	□□□□□ -0.2
PPP4C-205	ENST00000563200	IGHV1-58	A0A0C4DH39	117 aa		13.81	□□□□□ -0.2
PPP4C-205	ENST00000563200		F8W036	122 aa		13.81	□□□□□ -0.2
PPP4C-205	ENST00000563200	PRSS3P2	Q8NHM4	247 aa		13.81	□□□□□ -0.2
PPP4C-205	ENST00000563200	TIMM21	Q9BVV7	248 aa		13.81	□□□□□ -0.2
PPP4C-205	ENST00000563200	HNRNPA3	P51991	378 aa	Known RBP	13.8	□□□□□ -0.2
PPP4C-205	ENST00000563200	SMAGP	Q0VAQ4	97 aa		13.8	□□□□□ -0.2
PPP4C-205	ENST00000563200	ATP5L2	Q7Z4Y8	100 aa		13.8	□□□□□ -0.2
PPP4C-205	ENST00000563200	PLAC8	Q9NZF1	115 aa		13.8	□□□□□ -0.2
PPP4C-205	ENST00000563200	NPY	P01303	97 aa		13.79	□□□□□ -0.2
PPP4C-205	ENST00000563200	FAM104A	Q969W3	186 aa		13.79	□□□□□ -0.2
PPP4C-205	ENST00000563200	SMIM2	Q9BVW6	85 aa		13.79	□□□□□ -0.2
PPP4C-205	ENST00000563200	C1orf196	B1AJZ1	125 aa		13.78	□□□□□ -0.2
PPP4C-205	ENST00000563200	PHOX2A	O14813	284 aa		13.78	□□□□□ -0.2
PPP4C-205	ENST00000563200	PPBP	P02775	128 aa		13.78	□□□□□ -0.2
PPP4C-205	ENST00000563200	RNASE13	Q5GAN3	156 aa	Known RBP	13.78	□□□□□ -0.2
PPP4C-205	ENST00000563200	LINC00526	Q96FQ7	95 aa		13.78	□□□□□ -0.2
PPP4C-205	ENST00000563200	DPH3	Q96FX2	82 aa		13.78	□□□□□ -0.2
PPP4C-205	ENST00000563200	TCAP	O15273	167 aa		13.77	□□□□□ -0.21
PPP4C-205	ENST00000563200	PNRC1	Q12796	327 aa	Predicted RBP	13.77	□□□□□ -0.21
PPP4C-205	ENST00000563200		Q6ZUT4	128 aa		13.77	□□□□□ -0.21
PPP4C-205	ENST00000563200	TMEM18	Q96B42	140 aa		13.77	□□□□□ -0.21
PPP4C-205	ENST00000563200	RPL39	P62891	51 aa	Known RBP	13.76	□□□□□ -0.21
PPP4C-205	ENST00000563200	TRAV13-1	A0A0B4J241	112 aa		13.74	□□□□□ -0.21
PPP4C-205	ENST00000563200	OXT	P01178	125 aa		13.74	□□□□□ -0.21
PPP4C-205	ENST00000563200	TMA7	Q9Y2S6	64 aa	Known RBP	13.74	□□□□□ -0.21
PPP4C-205	ENST00000563200		A0A096LNI7	61 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	IGKV2-24	A0A0C4DH68	120 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	ORMDL3	Q8N138	153 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	COX7A2L	O14548	114 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	MAJIN	Q3KP22	176 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	TMEM136	Q6ZRR5	245 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	ANAPC16	Q96DE5	110 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	CARD19	Q96LW7	228 aa		13.73	□□□□□ -0.21
PPP4C-205	ENST00000563200	ZNF561-AS1	K7EIQ3	104 aa		13.72	□□□□□ -0.21
PPP4C-205	ENST00000563200	SPANXA1	Q9NS26	97 aa		13.72	□□□□□ -0.21
PPP4C-205	ENST00000563200	MT-ND4L	P03901	98 aa		13.71	□□□□□ -0.22
PPP4C-205	ENST00000563200	SYCN	Q0VAF6	134 aa		13.71	□□□□□ -0.22
PPP4C-205	ENST00000563200	PRELID3A	Q96N28	172 aa		13.71	□□□□□ -0.22
PPP4C-205	ENST00000563200	HMCN2	Q8NDA2	5059 aa		13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	IGLV4-69	A0A075B6H9	119 aa		13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	PRSS47	A8MTI9	375 aa		13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	MAL	P21145	153 aa		13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	MRPS36	P82909	103 aa	Known RBP	13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	SVBP	Q8N300	66 aa		13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	OPRPN	Q99935	248 aa	Predicted RBP	13.7	□□□□□ -0.22
PPP4C-205	ENST00000563200	STPG4	Q8N801	248 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms