RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 J3QL48 77 aa10.84□□□□□ -0.67
CLK3-210ENST00000563112 TSHBP01222 138 aa10.84□□□□□ -0.67
CLK3-210ENST00000563112 ESDP10768 282 aa10.84□□□□□ -0.67
CLK3-210ENST00000563112 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
CLK3-210ENST00000563112 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
CLK3-210ENST00000563112 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
CLK3-210ENST00000563112 C9JQL5 133 aa10.83□□□□□ -0.68
CLK3-210ENST00000563112 VCYO14598 125 aa10.83□□□□□ -0.68
CLK3-210ENST00000563112 RPS10P46783 165 aaKnown RBP10.83□□□□□ -0.68
CLK3-210ENST00000563112 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
CLK3-210ENST00000563112 CARHSP1Q9Y2V2 147 aaKnown RBP10.83□□□□□ -0.68
CLK3-210ENST00000563112 FCER1GP30273 86 aa10.82□□□□□ -0.68
CLK3-210ENST00000563112 SRSF3P84103 164 aaKnown RBP10.82□□□□□ -0.68
CLK3-210ENST00000563112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
CLK3-210ENST00000563112 A0A1B0GW15 77 aa10.81□□□□□ -0.68
CLK3-210ENST00000563112 SMIM27A0A1W2PRY6 76 aa10.81□□□□□ -0.68
CLK3-210ENST00000563112 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
CLK3-210ENST00000563112 SMKR1H3BMG3 65 aa10.81□□□□□ -0.68
CLK3-210ENST00000563112 SMAGPQ0VAQ4 97 aa10.81□□□□□ -0.68
CLK3-210ENST00000563112 C15orf56Q8N910 161 aa10.81□□□□□ -0.68
CLK3-210ENST00000563112 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
CLK3-210ENST00000563112 SLPIP03973 132 aa10.8□□□□□ -0.68
CLK3-210ENST00000563112 CAMPP49913 170 aa10.8□□□□□ -0.68
CLK3-210ENST00000563112 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
CLK3-210ENST00000563112 SUMO2P61956 95 aaKnown RBP10.8□□□□□ -0.68
CLK3-210ENST00000563112 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
CLK3-210ENST00000563112 FAM104BQ5XKR9 115 aa10.8□□□□□ -0.68
CLK3-210ENST00000563112 MRPL52Q86TS9 123 aaKnown RBP10.8□□□□□ -0.68
CLK3-210ENST00000563112 KIR2DL4Q99706 377 aa10.8□□□□□ -0.68
CLK3-210ENST00000563112 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
CLK3-210ENST00000563112 S100A8P05109 93 aa10.79□□□□□ -0.68
CLK3-210ENST00000563112 XCL1P47992 114 aa10.79□□□□□ -0.68
CLK3-210ENST00000563112 SS18Q15532 418 aa10.79□□□□□ -0.68
CLK3-210ENST00000563112 HIGD2BQ4VC39 106 aa10.79□□□□□ -0.68
CLK3-210ENST00000563112 CCL25O15444 150 aa10.78□□□□□ -0.68
CLK3-210ENST00000563112 FOXI1Q12951 378 aa10.78□□□□□ -0.68
CLK3-210ENST00000563112 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
CLK3-210ENST00000563112 ZNF664Q8N3J9 261 aa10.78□□□□□ -0.68
CLK3-210ENST00000563112 NRACQ8N912 160 aa10.78□□□□□ -0.68
CLK3-210ENST00000563112 CDC42SE2Q9NRR3 84 aa10.78□□□□□ -0.68
CLK3-210ENST00000563112 KRTAP29-1A8MX34 341 aaPredicted RBP10.77□□□□□ -0.69
CLK3-210ENST00000563112 PANO1I0J062 215 aa10.77□□□□□ -0.69
CLK3-210ENST00000563112 CKS2P33552 79 aa10.77□□□□□ -0.69
CLK3-210ENST00000563112 KRTAP10-4P60372 401 aaPredicted RBP10.77□□□□□ -0.69
CLK3-210ENST00000563112 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
CLK3-210ENST00000563112 GVQW2A0A096LPI5 108 aaPredicted RBP10.76□□□□□ -0.69
CLK3-210ENST00000563112 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
CLK3-210ENST00000563112 C20orf78Q9BR46 151 aa10.76□□□□□ -0.69
CLK3-210ENST00000563112 TMA7Q9Y2S6 64 aaKnown RBP10.76□□□□□ -0.69
CLK3-210ENST00000563112 IGHV1-58A0A0C4DH39 117 aa10.75□□□□□ -0.69
CLK3-210ENST00000563112 TRBV24-1A0A075B6N3 115 aa10.74□□□□□ -0.69
CLK3-210ENST00000563112 TCAPO15273 167 aa10.74□□□□□ -0.69
CLK3-210ENST00000563112 HBBP68871 147 aa10.74□□□□□ -0.69
CLK3-210ENST00000563112 COX6A2Q02221 97 aa10.74□□□□□ -0.69
CLK3-210ENST00000563112 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
CLK3-210ENST00000563112 CD164L2Q6UWJ8 174 aa10.74□□□□□ -0.69
CLK3-210ENST00000563112 CSDC2Q9Y534 153 aaKnown RBP10.74□□□□□ -0.69
CLK3-210ENST00000563112 A0A087WYN8 130 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 C1orf196B1AJZ1 125 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 CHTF8P0CG12 524 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 RHEBQ15382 184 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 SPACA4Q8TDM5 124 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 SMCO4Q9NRQ5 59 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 PKIGQ9Y2B9 76 aa10.73□□□□□ -0.69
CLK3-210ENST00000563112 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
CLK3-210ENST00000563112 RPL32P62910 135 aaKnown RBP10.72□□□□□ -0.69
CLK3-210ENST00000563112 UBE2D4Q9Y2X8 147 aa10.72□□□□□ -0.69
CLK3-210ENST00000563112 D6R8Y8 96 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 ZNF561-AS1K7EIQ3 104 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 SCO1O75880 301 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 OXTP01178 125 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 PPBPP02775 128 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 TIMM21Q9BVV7 248 aa10.71□□□□□ -0.69
CLK3-210ENST00000563112 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
CLK3-210ENST00000563112 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
CLK3-210ENST00000563112 MALP21145 153 aa10.7□□□□□ -0.7
CLK3-210ENST00000563112 PNRC1Q12796 327 aaPredicted RBP10.7□□□□□ -0.7
CLK3-210ENST00000563112 MAJINQ3KP22 176 aa10.7□□□□□ -0.7
CLK3-210ENST00000563112 PLAC8Q9NZF1 115 aa10.7□□□□□ -0.7
CLK3-210ENST00000563112 COX7A2LO14548 114 aa10.69□□□□□ -0.7
CLK3-210ENST00000563112 PHOX2AO14813 284 aa10.69□□□□□ -0.7
CLK3-210ENST00000563112 ATP5L2Q7Z4Y8 100 aa10.69□□□□□ -0.7
CLK3-210ENST00000563112 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
CLK3-210ENST00000563112 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
CLK3-210ENST00000563112 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
CLK3-210ENST00000563112 RNASE13Q5GAN3 156 aaKnown RBP10.68□□□□□ -0.7
CLK3-210ENST00000563112 C7orf33Q8WU49 177 aa10.68□□□□□ -0.7
CLK3-210ENST00000563112 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
CLK3-210ENST00000563112 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
CLK3-210ENST00000563112 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
CLK3-210ENST00000563112 NPYP01303 97 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 MT-ND4LP03901 98 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 SYCNQ0VAF6 134 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 TMEM136Q6ZRR5 245 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 Q6ZUT4 128 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 ORMDL3Q8N138 153 aa10.67□□□□□ -0.7
CLK3-210ENST00000563112 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
CLK3-210ENST00000563112 RAB5AP20339 215 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms