RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 A0A0J9YX75 114 aa9.79□□□□□ -0.84
CLK3-206ENST00000562078 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
CLK3-206ENST00000562078 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
CLK3-206ENST00000562078 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
CLK3-206ENST00000562078 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
CLK3-206ENST00000562078 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
CLK3-206ENST00000562078 GNRH2O43555 120 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 PPP1R17O96001 155 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
CLK3-206ENST00000562078 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
CLK3-206ENST00000562078 TMEM61Q8N0U2 210 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 JPT2Q9H910 190 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
CLK3-206ENST00000562078 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
CLK3-206ENST00000562078 NACAE9PAV3 2078 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 SEC61GP60059 68 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 C9orf47Q6ZRZ4 202 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 PEMTQ9UBM1 199 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 MUC4Q99102 2169 aa9.78□□□□□ -0.84
CLK3-206ENST00000562078 LINC00315P59091 139 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 PYGO1Q9Y3Y4 419 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 AKAP9Q99996 3911 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 VCYO14598 125 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 UPK3BQ9BT76 320 aa9.77□□□□□ -0.85
CLK3-206ENST00000562078 IGHV4-59P01825 116 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 DEFB112Q30KQ8 113 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 SUMO4Q6EEV6 95 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 DAND5Q8N907 189 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 U3KQE9 123 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 A0A087WWL8 130 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 A8MZ25 164 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 TIRAPP58753 221 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 DEFB1P60022 68 aa9.76□□□□□ -0.85
CLK3-206ENST00000562078 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
CLK3-206ENST00000562078 MIAQ16674 131 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 KIF25-AS1Q9Y6Z4 181 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 A0A087WW49 117 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 F5H697 171 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 H3BUA1 57 aa9.75□□□□□ -0.85
CLK3-206ENST00000562078 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
CLK3-206ENST00000562078 ZFAND2AQ8N6M9 145 aa9.74□□□□□ -0.85
CLK3-206ENST00000562078 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
CLK3-206ENST00000562078 A0A087WVE0 104 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 NDUFA4O00483 81 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 FSHBP01225 129 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 SERP2Q8N6R1 65 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 C20orf173Q96LM9 149 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 C22orf24Q9Y442 160 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 IGLV1-40P01703 118 aa9.73□□□□□ -0.85
CLK3-206ENST00000562078 IGKV3D-7A0A0C4DH55 119 aa9.72□□□□□ -0.85
CLK3-206ENST00000562078 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
CLK3-206ENST00000562078 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
CLK3-206ENST00000562078 NXPH4O95158 308 aa9.72□□□□□ -0.85
CLK3-206ENST00000562078 BAALC-AS2P0C853 105 aa9.72□□□□□ -0.85
CLK3-206ENST00000562078 CFHR3Q02985 330 aa9.72□□□□□ -0.85
CLK3-206ENST00000562078 C16orf92Q96LL3 132 aa9.72□□□□□ -0.85
CLK3-206ENST00000562078 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.85
CLK3-206ENST00000562078 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.86
CLK3-206ENST00000562078 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.86
CLK3-206ENST00000562078 IGLV4-3A0A075B6K6 122 aa9.7□□□□□ -0.86
CLK3-206ENST00000562078 FAM74A4Q5TZK3 123 aa9.7□□□□□ -0.86
CLK3-206ENST00000562078 C10orf99Q6UWK7 81 aa9.7□□□□□ -0.86
CLK3-206ENST00000562078 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
CLK3-206ENST00000562078 COX7A2LO14548 114 aa9.7□□□□□ -0.86
CLK3-206ENST00000562078 ACANP16112 2415 aa9.69□□□□□ -0.86
CLK3-206ENST00000562078 EDN2P20800 178 aa9.69□□□□□ -0.86
CLK3-206ENST00000562078 RPL11P62913 178 aaKnown RBP9.69□□□□□ -0.86
CLK3-206ENST00000562078 BEAN1Q3B7T3 259 aa9.69□□□□□ -0.86
CLK3-206ENST00000562078 NOTCH2Q04721 2471 aa9.69□□□□□ -0.86
CLK3-206ENST00000562078 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 MALP21145 153 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 FHL2Q14192 279 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
CLK3-206ENST00000562078 Q6YL49 198 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 Q8N2B8 174 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 C1orf43Q9BWL3 253 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
CLK3-206ENST00000562078 SONP18583 2426 aaKnown RBP9.68□□□□□ -0.86
CLK3-206ENST00000562078 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 PSMB8P28062 276 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 PFN2P35080 140 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 KRTAP1-1Q07627 177 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 PRO0628Q9UI54 55 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 C20orf203Q8NBC4 194 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 FAM218AQ96MZ4 157 aa9.67□□□□□ -0.86
CLK3-206ENST00000562078 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
CLK3-206ENST00000562078 F6UB75 175 aa9.66□□□□□ -0.86
CLK3-206ENST00000562078 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
CLK3-206ENST00000562078 LENEPQ9Y5L5 61 aa9.66□□□□□ -0.86
CLK3-206ENST00000562078 SOCS3O14543 225 aa9.66□□□□□ -0.86
CLK3-206ENST00000562078 RPL35AP18077 110 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms