RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 GAGE12HA6NDE8 117 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 TCAPO15273 167 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 NPYP01303 97 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 S100PP25815 95 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 ATP5L2Q7Z4Y8 100 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 ORMDL3Q8N138 153 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 PRELID3AQ96N28 172 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 RPS10P5Q9NQ39 176 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 SMCO4Q9NRQ5 59 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 PRR34Q9NV39 138 aa6.67□□□□□ -1.34
HERC1-212ENST00000561348 TRAV8-4A0A0B4J246 113 aa6.66□□□□□ -1.34
HERC1-212ENST00000561348 TRBV27A0A0K0K1C4 114 aa6.66□□□□□ -1.34
HERC1-212ENST00000561348 H7C423 109 aa6.66□□□□□ -1.34
HERC1-212ENST00000561348 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
HERC1-212ENST00000561348 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
HERC1-212ENST00000561348 CBLN2Q8IUK8 224 aa6.66□□□□□ -1.34
HERC1-212ENST00000561348 CTDSP1Q9GZU7 261 aa6.66□□□□□ -1.34
HERC1-212ENST00000561348 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
HERC1-212ENST00000561348 hDV102S1A0JD36 115 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 CDK2AP2O75956 126 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 PPBPP02775 128 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 ESDP10768 282 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 RAB5AP20339 215 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 XCL1P47992 114 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 RHEBQ15382 184 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 CHCHD10Q8WYQ3 142 aaPredicted RBP6.65□□□□□ -1.34
HERC1-212ENST00000561348 C20orf78Q9BR46 151 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 SMIM2Q9BVW6 85 aa6.65□□□□□ -1.34
HERC1-212ENST00000561348 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.35
HERC1-212ENST00000561348 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 SMR3BP02814 79 aaPredicted RBP6.64□□□□□ -1.35
HERC1-212ENST00000561348 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
HERC1-212ENST00000561348 SMAGPQ0VAQ4 97 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 SS18Q15532 418 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 KIAA1644Q3SXP7 199 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 ZNF664Q8N3J9 261 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 TMEM18Q96B42 140 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 MAP1LC3AQ9H492 121 aa6.64□□□□□ -1.35
HERC1-212ENST00000561348 TRBV24-1A0A075B6N3 115 aa6.63□□□□□ -1.35
HERC1-212ENST00000561348 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
HERC1-212ENST00000561348 CCL25O15444 150 aa6.63□□□□□ -1.35
HERC1-212ENST00000561348 PRSS1P07477 247 aa6.63□□□□□ -1.35
HERC1-212ENST00000561348 RPL39P62891 51 aaKnown RBP6.63□□□□□ -1.35
HERC1-212ENST00000561348 HIGD2BQ4VC39 106 aa6.63□□□□□ -1.35
HERC1-212ENST00000561348 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
HERC1-212ENST00000561348 LINC00959A0A1B0GUT2 108 aa6.62□□□□□ -1.35
HERC1-212ENST00000561348 COLCA2A8K830 154 aa6.62□□□□□ -1.35
HERC1-212ENST00000561348 KRTAP26-1Q6PEX3 210 aa6.62□□□□□ -1.35
HERC1-212ENST00000561348 IMMP2LQ96T52 175 aa6.62□□□□□ -1.35
HERC1-212ENST00000561348 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
HERC1-212ENST00000561348 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
HERC1-212ENST00000561348 PHOX2AO14813 284 aa6.61□□□□□ -1.35
HERC1-212ENST00000561348 Q6ZUT4 128 aa6.61□□□□□ -1.35
HERC1-212ENST00000561348 DPH3Q96FX2 82 aa6.61□□□□□ -1.35
HERC1-212ENST00000561348 OPRPNQ99935 248 aaPredicted RBP6.61□□□□□ -1.35
HERC1-212ENST00000561348 FAM30AQ9NZY2 134 aa6.61□□□□□ -1.35
HERC1-212ENST00000561348 UBE2D4Q9Y2X8 147 aa6.61□□□□□ -1.35
HERC1-212ENST00000561348 C1orf196B1AJZ1 125 aa6.6□□□□□ -1.35
HERC1-212ENST00000561348 MALP21145 153 aa6.6□□□□□ -1.35
HERC1-212ENST00000561348 XGP55808 180 aa6.6□□□□□ -1.35
HERC1-212ENST00000561348 RAB5BP61020 215 aa6.6□□□□□ -1.35
HERC1-212ENST00000561348 CFAP161Q6P656 301 aa6.6□□□□□ -1.35
HERC1-212ENST00000561348 MRPL52Q86TS9 123 aaKnown RBP6.6□□□□□ -1.35
HERC1-212ENST00000561348 FABP9Q0Z7S8 132 aa6.59□□□□□ -1.35
HERC1-212ENST00000561348 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
HERC1-212ENST00000561348 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
HERC1-212ENST00000561348 TRAV9-1A0A075B6T8 112 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.58□□□□□ -1.36
HERC1-212ENST00000561348 IFITM10A6NMD0 228 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 EPM2AB3EWF7 344 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 IFI27P40305 119 aaPredicted RBP6.58□□□□□ -1.36
HERC1-212ENST00000561348 RPL32P62910 135 aaKnown RBP6.58□□□□□ -1.36
HERC1-212ENST00000561348 FOXI1Q12951 378 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 Q8N1X5 172 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 Q8N8P6 123 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 PRSS3P2Q8NHM4 247 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 KRTAP17-1Q9BYP8 105 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 LAMTOR2Q9Y2Q5 125 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
HERC1-212ENST00000561348 TGIF2-C20orf24A0A0A6YYL0 155 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 CD164L2Q6UWJ8 174 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 C5orf38Q86SI9 138 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 C15orf56Q8N910 161 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 CYSLTR1Q9Y271 337 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
HERC1-212ENST00000561348 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 COX7A2LO14548 114 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 Q5VSD8 79 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 TIMM21Q9BVV7 248 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 GNB1LQ9BYB4 327 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 NXT2Q9NPJ8 142 aaKnown RBP6.56□□□□□ -1.36
HERC1-212ENST00000561348 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
HERC1-212ENST00000561348 HERC2O95714 4834 aa6.56□□□□□ -1.36
HERC1-212ENST00000561348 IGHV3-64A0A075B6Q5 118 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 IGHV1-58A0A0C4DH39 117 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 S100A6P06703 90 aa6.55□□□□□ -1.36
HERC1-212ENST00000561348 ORMDL2Q53FV1 153 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms