RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 IGHV1-58A0A0C4DH39 117 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 ATOX1O00244 68 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 KRTAP1-3Q8IUG1 177 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 IGLV4-3A0A075B6K6 122 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 A0A0J9YXV3 536 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 LOC107984640A0A0U1RRK4 108 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 F5H697 171 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 DAND5Q8N907 189 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 UBE2E2Q96LR5 201 aa10.23□□□□□ -0.77
RABGGTA-220ENST00000560998 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
RABGGTA-220ENST00000560998 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
RABGGTA-220ENST00000560998 HIST1H4AP62805 103 aaKnown RBP10.22□□□□□ -0.77
RABGGTA-220ENST00000560998 CITED2Q99967 270 aaPredicted RBP10.22□□□□□ -0.77
RABGGTA-220ENST00000560998 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
RABGGTA-220ENST00000560998 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
RABGGTA-220ENST00000560998 TRAV25A0A0B4J276 109 aa10.21□□□□□ -0.77
RABGGTA-220ENST00000560998 K7EQG2 157 aa10.21□□□□□ -0.77
RABGGTA-220ENST00000560998 SMCR5Q8TEV8 140 aa10.21□□□□□ -0.77
RABGGTA-220ENST00000560998 CREBBPQ92793 2442 aa10.21□□□□□ -0.78
RABGGTA-220ENST00000560998 HOXD3P31249 432 aaPredicted RBP10.21□□□□□ -0.78
RABGGTA-220ENST00000560998 Q8N2B8 174 aa10.21□□□□□ -0.78
RABGGTA-220ENST00000560998 C2orf48Q96LS8 159 aa10.21□□□□□ -0.78
RABGGTA-220ENST00000560998 TEX15Q9BXT5 2789 aa10.21□□□□□ -0.78
RABGGTA-220ENST00000560998 COX7A2LO14548 114 aa10.2□□□□□ -0.78
RABGGTA-220ENST00000560998 TMEM258P61165 79 aa10.2□□□□□ -0.78
RABGGTA-220ENST00000560998 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
RABGGTA-220ENST00000560998 M0QY20 66 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 TRACP01848 142 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 INAFM2P0DMQ5 153 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 SNRPD3P62318 126 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 OPRPNQ99935 248 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 APCP25054 2843 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 A0A087WWL8 130 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 DUX5Q96PT3 197 aa10.19□□□□□ -0.78
RABGGTA-220ENST00000560998 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
RABGGTA-220ENST00000560998 MUC4Q99102 2169 aa10.18□□□□□ -0.78
RABGGTA-220ENST00000560998 TRAV12-3A0A0B4J271 114 aa10.17□□□□□ -0.78
RABGGTA-220ENST00000560998 JPT2Q9H910 190 aa10.17□□□□□ -0.78
RABGGTA-220ENST00000560998 TINCRA0A1B0GVN0 87 aa10.17□□□□□ -0.78
RABGGTA-220ENST00000560998 C18orf65Q6ZTR6 163 aa10.17□□□□□ -0.78
RABGGTA-220ENST00000560998 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
RABGGTA-220ENST00000560998 ADARB2-AS1A8MUL3 147 aa10.16□□□□□ -0.78
RABGGTA-220ENST00000560998 CD28P10747 220 aa10.16□□□□□ -0.78
RABGGTA-220ENST00000560998 IGKV3-20P01619 116 aa10.15□□□□□ -0.78
RABGGTA-220ENST00000560998 SLURP1P55000 103 aa10.15□□□□□ -0.78
RABGGTA-220ENST00000560998 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
RABGGTA-220ENST00000560998 DEFB136Q30KP8 78 aa10.15□□□□□ -0.78
RABGGTA-220ENST00000560998 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
RABGGTA-220ENST00000560998 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
RABGGTA-220ENST00000560998 TRAV12-2A0A075B6T6 113 aa10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 DAZ2Q13117 558 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 Q6ZSV7 163 aa10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 DAZ4Q86SG3 579 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 DAZ3Q9NR90 486 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 IGHV3-16A0A0C4DH30 117 aa10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 RPL18AQ02543 176 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 FAM74A4Q5TZK3 123 aa10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 TMEM86BQ8N661 226 aa10.14□□□□□ -0.79
RABGGTA-220ENST00000560998 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
RABGGTA-220ENST00000560998 NDUFA1O15239 70 aa10.13□□□□□ -0.79
RABGGTA-220ENST00000560998 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
RABGGTA-220ENST00000560998 WFDC11Q8NEX6 87 aa10.13□□□□□ -0.79
RABGGTA-220ENST00000560998 C4orf3Q8WVX3 66 aa10.13□□□□□ -0.79
RABGGTA-220ENST00000560998 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
RABGGTA-220ENST00000560998 BEAN1Q3B7T3 259 aa10.12□□□□□ -0.79
RABGGTA-220ENST00000560998 TENM4Q6N022 2769 aa10.11□□□□□ -0.79
RABGGTA-220ENST00000560998 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
RABGGTA-220ENST00000560998 hADV29S1A0JD25 119 aa10.11□□□□□ -0.79
RABGGTA-220ENST00000560998 BAALC-AS2P0C853 105 aa10.11□□□□□ -0.79
RABGGTA-220ENST00000560998 NPC2P61916 151 aa10.11□□□□□ -0.79
RABGGTA-220ENST00000560998 DPH3Q96FX2 82 aa10.11□□□□□ -0.79
RABGGTA-220ENST00000560998 TIRAPP58753 221 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 HIST2H2BCQ6DN03 193 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 SERP2Q8N6R1 65 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 LINC00308Q8TCZ7 52 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 FAM104AQ969W3 186 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 OVOL2Q9BRP0 275 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 SORL1Q92673 2214 aa10.1□□□□□ -0.79
RABGGTA-220ENST00000560998 MYO9AB2RTY4 2548 aa10.09□□□□□ -0.79
RABGGTA-220ENST00000560998 TLN2Q9Y4G6 2542 aa10.09□□□□□ -0.79
RABGGTA-220ENST00000560998 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
RABGGTA-220ENST00000560998 KHDC1LQ5JSQ8 128 aa10.09□□□□□ -0.79
RABGGTA-220ENST00000560998 Q6JHZ5 121 aa10.09□□□□□ -0.79
RABGGTA-220ENST00000560998 DNAJC9-AS1A6NH13 148 aa10.08□□□□□ -0.8
RABGGTA-220ENST00000560998 A8MTW9 85 aa10.08□□□□□ -0.8
RABGGTA-220ENST00000560998 DEFB131AP59861 70 aa10.08□□□□□ -0.8
RABGGTA-220ENST00000560998 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
RABGGTA-220ENST00000560998 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
RABGGTA-220ENST00000560998 ZNF469Q96JG9 3925 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-220ENST00000560998 HIST2H2BDQ6DRA6 164 aa10.06□□□□□ -0.8
RABGGTA-220ENST00000560998 MRAPQ8TCY5 172 aa10.06□□□□□ -0.8
RABGGTA-220ENST00000560998 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
RABGGTA-220ENST00000560998 NBPF19A0A087WUL8 3843 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms