RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NDPQ00604 133 aa14.07□□□□□ -0.16
SEMA4B-215ENST00000560089 POLQO75417 2590 aa14.07□□□□□ -0.16
SEMA4B-215ENST00000560089 A0A0U1RQV1 116 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 GHRHP01286 108 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 C20orf197Q8N268 126 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 Q9HAA7 133 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 MUC4Q99102 2169 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 WNK2Q9Y3S1 2297 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 RNASE4P34096 147 aaKnown RBP14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 C20orf203Q8NBC4 194 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 VSIG2Q96IQ7 327 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 FAM218AQ96MZ4 157 aa14.06□□□□□ -0.16
SEMA4B-215ENST00000560089 RBMY1BA6NDE4 496 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 RBMY1EA6NEQ0 496 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 RBMY1DP0C7P1 496 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 RBMY1A1P0DJD3 496 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 RBMY1CP0DJD4 496 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 RBMY1FQ15415 496 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 C11orf71Q6IPW1 123 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 UBE2D4Q9Y2X8 147 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 FBN2P35556 2912 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 TIMM17BO60830 172 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 C14orf132Q9NPU4 83 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 TRBV6-5A0A0K0K1A5 114 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 AVPP01185 164 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 IGHG2P01859 326 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 CIRBPQ14011 172 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 C16orf95Q9H693 158 aa14.05□□□□□ -0.16
SEMA4B-215ENST00000560089 FAM74A4Q5TZK3 123 aa14.04□□□□□ -0.16
SEMA4B-215ENST00000560089 MRPS36P82909 103 aaKnown RBP14.04□□□□□ -0.16
SEMA4B-215ENST00000560089 CD28P10747 220 aa14.03□□□□□ -0.16
SEMA4B-215ENST00000560089 BRK1Q8WUW1 75 aa14.03□□□□□ -0.16
SEMA4B-215ENST00000560089 LINC00308Q8TCZ7 52 aa14.02□□□□□ -0.17
SEMA4B-215ENST00000560089 C20orf173Q96LM9 149 aa14.01□□□□□ -0.17
SEMA4B-215ENST00000560089 SMIM26A0A096LP01 95 aa14.01□□□□□ -0.17
SEMA4B-215ENST00000560089 XCL1P47992 114 aa14.01□□□□□ -0.17
SEMA4B-215ENST00000560089 HILS1P60008 231 aa14.01□□□□□ -0.17
SEMA4B-215ENST00000560089 LY6G5BQ8NDX9 201 aa14.01□□□□□ -0.17
SEMA4B-215ENST00000560089 XCL2Q9UBD3 114 aa14.01□□□□□ -0.17
SEMA4B-215ENST00000560089 FP248Q71RG6 208 aaPredicted RBP14□□□□□ -0.17
SEMA4B-215ENST00000560089 TRBV12-3P01733 135 aa14□□□□□ -0.17
SEMA4B-215ENST00000560089 NPBQ8NG41 125 aa14□□□□□ -0.17
SEMA4B-215ENST00000560089 USP9YO00507 2555 aaPredicted RBP13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 ABCA12Q86UK0 2595 aa13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 TRAV23DV6A0A075B6W5 121 aa13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 KNCNA6PVL3 124 aa13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 HOXD3P31249 432 aaPredicted RBP13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 RNASE13Q5GAN3 156 aaKnown RBP13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 KMT2BQ9UMN6 2715 aaPredicted RBP13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 DEFB1P60022 68 aa13.99□□□□□ -0.17
SEMA4B-215ENST00000560089 ZFHX3Q15911 3703 aa13.98□□□□□ -0.17
SEMA4B-215ENST00000560089 A0A0U1RRA0 63 aa13.98□□□□□ -0.17
SEMA4B-215ENST00000560089 C9orf129Q5T035 196 aaKnown RBP13.98□□□□□ -0.17
SEMA4B-215ENST00000560089 RPL28P46779 137 aaKnown RBP13.97□□□□□ -0.17
SEMA4B-215ENST00000560089 C15orf32Q32M92 178 aa13.97□□□□□ -0.17
SEMA4B-215ENST00000560089 KAAG1Q9UBP8 84 aa13.97□□□□□ -0.17
SEMA4B-215ENST00000560089 NBPF19A0A087WUL8 3843 aa13.96□□□□□ -0.17
SEMA4B-215ENST00000560089 H7BZZ5 65 aa13.96□□□□□ -0.18
SEMA4B-215ENST00000560089 M0QY20 66 aa13.96□□□□□ -0.18
SEMA4B-215ENST00000560089 PTPN13Q12923 2485 aa13.95□□□□□ -0.18
SEMA4B-215ENST00000560089 NDUFA1O15239 70 aa13.94□□□□□ -0.18
SEMA4B-215ENST00000560089 CLEC19AQ6UXS0 136 aa13.94□□□□□ -0.18
SEMA4B-215ENST00000560089 WFDC9Q8NEX5 89 aa13.93□□□□□ -0.18
SEMA4B-215ENST00000560089 ZNF625Q96I27 306 aaPredicted RBP13.93□□□□□ -0.18
SEMA4B-215ENST00000560089 FAM104AQ969W3 186 aa13.92□□□□□ -0.18
SEMA4B-215ENST00000560089 HELZ2Q9BYK8 2649 aaKnown RBP13.92□□□□□ -0.18
SEMA4B-215ENST00000560089 DOPEY2Q9Y3R5 2298 aa13.92□□□□□ -0.18
SEMA4B-215ENST00000560089 SOSTDC1Q6X4U4 206 aa13.91□□□□□ -0.18
SEMA4B-215ENST00000560089 COPS9Q8WXC6 57 aa13.91□□□□□ -0.18
SEMA4B-215ENST00000560089 BPESC1Q9GZL8 116 aa13.91□□□□□ -0.18
SEMA4B-215ENST00000560089 F6UB75 175 aa13.91□□□□□ -0.18
SEMA4B-215ENST00000560089 LYPD5Q6UWN5 251 aa13.91□□□□□ -0.18
SEMA4B-215ENST00000560089 CCL19Q99731 98 aa13.9□□□□□ -0.18
SEMA4B-215ENST00000560089 DPM3Q9P2X0 92 aa13.9□□□□□ -0.18
SEMA4B-215ENST00000560089 SOCS3O14543 225 aa13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 Q9H8V8 135 aa13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 LINC00474Q9P2X8 69 aa13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 ANKRD17O75179 2603 aaKnown RBP13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 ZFP36P26651 326 aaKnown RBP13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 HIST2H2BCQ6DN03 193 aa13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 HIST2H2BDQ6DRA6 164 aa13.89□□□□□ -0.19
SEMA4B-215ENST00000560089 FAM19A1Q7Z5A9 133 aa13.88□□□□□ -0.19
SEMA4B-215ENST00000560089 ZANQ9Y493 2812 aa13.88□□□□□ -0.19
SEMA4B-215ENST00000560089 OBSCN-AS1Q96MR7 158 aa13.88□□□□□ -0.19
SEMA4B-215ENST00000560089 APRG1Q8IVJ8 170 aa13.87□□□□□ -0.19
SEMA4B-215ENST00000560089 CCDC140Q96MF4 163 aa13.87□□□□□ -0.19
SEMA4B-215ENST00000560089 NCR3O14931 201 aa13.87□□□□□ -0.19
SEMA4B-215ENST00000560089 FAM110DQ8TAY7 271 aaPredicted RBP13.87□□□□□ -0.19
SEMA4B-215ENST00000560089 OVOL2Q9BRP0 275 aa13.87□□□□□ -0.19
SEMA4B-215ENST00000560089 U3KQE9 123 aa13.87□□□□□ -0.19
SEMA4B-215ENST00000560089 ECSCRQ19T08 205 aa13.86□□□□□ -0.19
SEMA4B-215ENST00000560089 A0A087WYN8 130 aa13.86□□□□□ -0.19
SEMA4B-215ENST00000560089 CDKN2A-AS1Q9UH64 79 aa13.86□□□□□ -0.19
SEMA4B-215ENST00000560089 S100A7L2Q5SY68 101 aa13.86□□□□□ -0.19
SEMA4B-215ENST00000560089 ENHOQ6UWT2 76 aa13.86□□□□□ -0.19
SEMA4B-215ENST00000560089 LINC00482Q8N8I6 264 aa13.86□□□□□ -0.19
SEMA4B-215ENST00000560089 RBM3P98179 157 aaKnown RBP13.85□□□□□ -0.19
SEMA4B-215ENST00000560089 APCP25054 2843 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms