RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 APLNQ9ULZ1 77 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 PMVKQ15126 192 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 LINC01545Q5VT33 79 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 AMELXQ99217 191 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
HERC1-205ENST00000559886 PKIAP61925 76 aa8.34□□□□□ -1.07
HERC1-205ENST00000559886 MPV17L2Q567V2 206 aa8.34□□□□□ -1.07
HERC1-205ENST00000559886 ZC2HC1BQ5TFG8 222 aa8.34□□□□□ -1.07
HERC1-205ENST00000559886 LGALS9CQ6DKI2 356 aa8.34□□□□□ -1.07
HERC1-205ENST00000559886 VCX2Q9H322 139 aa8.34□□□□□ -1.07
HERC1-205ENST00000559886 CST9LQ9H4G1 147 aa8.34□□□□□ -1.07
HERC1-205ENST00000559886 IGLV4-60A0A075B6I1 120 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 A0A087WX48 190 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 PRSS29PA6NIE9 313 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 SCGB1D1O95968 90 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 RBX1P62877 108 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 ODF1Q14990 250 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.08
HERC1-205ENST00000559886 CCL18P55774 89 aa8.33□□□□□ -1.08
HERC1-205ENST00000559886 TCTAP57738 103 aa8.33□□□□□ -1.08
HERC1-205ENST00000559886 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
HERC1-205ENST00000559886 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
HERC1-205ENST00000559886 LINC00588Q9Y4M8 146 aa8.33□□□□□ -1.08
HERC1-205ENST00000559886 C20orf202A1L168 122 aa8.32□□□□□ -1.08
HERC1-205ENST00000559886 WFDC10BQ8IUB3 73 aa8.32□□□□□ -1.08
HERC1-205ENST00000559886 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
HERC1-205ENST00000559886 WWC2-AS2Q96NR7 200 aa8.32□□□□□ -1.08
HERC1-205ENST00000559886 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
HERC1-205ENST00000559886 MRPS16Q9Y3D3 137 aaKnown RBP8.32□□□□□ -1.08
HERC1-205ENST00000559886 Q8N3U1 123 aa8.31□□□□□ -1.08
HERC1-205ENST00000559886 STARD9Q9P2P6 4700 aa8.31□□□□□ -1.08
HERC1-205ENST00000559886 F8VRH5 84 aa8.31□□□□□ -1.08
HERC1-205ENST00000559886 SMIM6P0DI80 62 aa8.31□□□□□ -1.08
HERC1-205ENST00000559886 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
HERC1-205ENST00000559886 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
HERC1-205ENST00000559886 ZFAND6Q6FIF0 208 aa8.3□□□□□ -1.08
HERC1-205ENST00000559886 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
HERC1-205ENST00000559886 PLECQ15149 4684 aaKnown RBP8.3□□□□□ -1.08
HERC1-205ENST00000559886 UPK3BQ9BT76 320 aa8.3□□□□□ -1.08
HERC1-205ENST00000559886 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
HERC1-205ENST00000559886 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
HERC1-205ENST00000559886 LINC01556Q5JQF7 62 aa8.29□□□□□ -1.08
HERC1-205ENST00000559886 DPM2O94777 84 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
HERC1-205ENST00000559886 UBE2D1P51668 147 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 DNAH10OSP0CZ25 163 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 PLNP26678 52 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 ATOH7Q8N100 152 aa8.28□□□□□ -1.08
HERC1-205ENST00000559886 IGKCP01834 107 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 IGLC3P0DOY3 106 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 LINC00269Q8N2A0 174 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 LYSTQ99698 3801 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 TRAV13-1A0A0B4J241 112 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 A0A0J9YXV3 536 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 SIVA1O15304 175 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 FAM19A3Q7Z5A8 133 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 NFE4Q86UQ8 179 aa8.27□□□□□ -1.09
HERC1-205ENST00000559886 C11orf86A6NJI1 115 aa8.26□□□□□ -1.09
HERC1-205ENST00000559886 KLK12Q9UKR0 248 aa8.26□□□□□ -1.09
HERC1-205ENST00000559886 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
HERC1-205ENST00000559886 REG3AQ06141 175 aa8.26□□□□□ -1.09
HERC1-205ENST00000559886 PRR34Q9NV39 138 aa8.26□□□□□ -1.09
HERC1-205ENST00000559886 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 LINC00959A0A1B0GUT2 108 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 UBE2DNLQ8IWF7 75 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 LINC00518Q8N0U6 118 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 C12orf57Q99622 126 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 CHAC1Q9BUX1 264 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 SEC11AP67812 179 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 Q9H8V8 135 aa8.25□□□□□ -1.09
HERC1-205ENST00000559886 TRAV9-2A0A087WT02 112 aa8.24□□□□□ -1.09
HERC1-205ENST00000559886 CCL25O15444 150 aa8.24□□□□□ -1.09
HERC1-205ENST00000559886 MAJINQ3KP22 176 aa8.24□□□□□ -1.09
HERC1-205ENST00000559886 ENHOQ6UWT2 76 aa8.24□□□□□ -1.09
HERC1-205ENST00000559886 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 HERVK_113P63121 156 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 COX6A2Q02221 97 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 SS18Q15532 418 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 GEMIN7Q9H840 131 aaKnown RBP8.23□□□□□ -1.09
HERC1-205ENST00000559886 VPS13DQ5THJ4 4388 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 IGLV5-45A0A087WSX0 123 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
HERC1-205ENST00000559886 CASC10Q5T4H9 136 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 VAMP8Q9BV40 100 aa8.23□□□□□ -1.09
HERC1-205ENST00000559886 C3orf84H3BNL1 204 aa8.22□□□□□ -1.09
HERC1-205ENST00000559886 S100A12P80511 92 aa8.22□□□□□ -1.09
HERC1-205ENST00000559886 STPG4Q8N801 248 aa8.22□□□□□ -1.09
HERC1-205ENST00000559886 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
HERC1-205ENST00000559886 CRPP02741 224 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms