RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
SNX1-204ENST00000559061 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
SNX1-204ENST00000559061 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
SNX1-204ENST00000559061 IGLV10-54A0A075B6I4 117 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 CRPP02741 224 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 ZNF25P17030 456 aaPredicted RBP7.51□□□□□ -1.21
SNX1-204ENST00000559061 FCER1GP30273 86 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 RNASEKQ6P5S7 137 aaKnown RBP7.51□□□□□ -1.21
SNX1-204ENST00000559061 Q6ZUT4 128 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 Q8N814 137 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 Q8N8P6 123 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 NTN5Q8WTR8 489 aaPredicted RBP7.51□□□□□ -1.21
SNX1-204ENST00000559061 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 MAP1LC3AQ9H492 121 aa7.51□□□□□ -1.21
SNX1-204ENST00000559061 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
SNX1-204ENST00000559061 PSCAO43653 123 aa7.5□□□□□ -1.21
SNX1-204ENST00000559061 IFI27P40305 119 aaPredicted RBP7.5□□□□□ -1.21
SNX1-204ENST00000559061 RNASE13Q5GAN3 156 aaKnown RBP7.5□□□□□ -1.21
SNX1-204ENST00000559061 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
SNX1-204ENST00000559061 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
SNX1-204ENST00000559061 C1orf43Q9BWL3 253 aa7.5□□□□□ -1.21
SNX1-204ENST00000559061 TM2D2Q9BX73 214 aa7.5□□□□□ -1.21
SNX1-204ENST00000559061 CSDC2Q9Y534 153 aaKnown RBP7.5□□□□□ -1.21
SNX1-204ENST00000559061 MT-ND6P03923 174 aa7.49□□□□□ -1.21
SNX1-204ENST00000559061 AMMECR1LQ6DCA0 310 aa7.49□□□□□ -1.21
SNX1-204ENST00000559061 OR5A1Q8NGJ0 315 aa7.49□□□□□ -1.21
SNX1-204ENST00000559061 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
SNX1-204ENST00000559061 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 LINC00959A0A1B0GUT2 108 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 C16orf90A8MZG2 172 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 FABP9Q0Z7S8 132 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 COX19Q49B96 90 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 RMI2Q96E14 147 aa7.48□□□□□ -1.21
SNX1-204ENST00000559061 USP17L23D6RBM5 183 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 SCO1O75880 301 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 FOXI1Q12951 378 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 C15orf56Q8N910 161 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
SNX1-204ENST00000559061 SMCO4Q9NRQ5 59 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 TRAPPC1Q9Y5R8 145 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 COX11Q9Y6N1 276 aa7.47□□□□□ -1.21
SNX1-204ENST00000559061 IGLV4-3A0A075B6K6 122 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 A0A096LNJ9 63 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 GAGE12HA6NDE8 117 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 COLCA2A8K830 154 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 PRSS1P07477 247 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
SNX1-204ENST00000559061 LINC00173Q6ZV60 143 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 C18orf32Q8TCD1 76 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 NXT2Q9NPJ8 142 aaKnown RBP7.46□□□□□ -1.22
SNX1-204ENST00000559061 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.22
SNX1-204ENST00000559061 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.45□□□□□ -1.22
SNX1-204ENST00000559061 IGIPA6NJ69 53 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 SLPIP03973 132 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 MRPS36P82909 103 aaKnown RBP7.45□□□□□ -1.22
SNX1-204ENST00000559061 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 CDPF1Q6NVV7 123 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 C2orf66Q6UXQ4 117 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 PGPEP1Q9NXJ5 209 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 PYGO1Q9Y3Y4 419 aa7.45□□□□□ -1.22
SNX1-204ENST00000559061 CCL25O15444 150 aa7.44□□□□□ -1.22
SNX1-204ENST00000559061 RAB5AP20339 215 aa7.44□□□□□ -1.22
SNX1-204ENST00000559061 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
SNX1-204ENST00000559061 K7EMI3 77 aa7.43□□□□□ -1.22
SNX1-204ENST00000559061 XCL1P47992 114 aa7.43□□□□□ -1.22
SNX1-204ENST00000559061 ORMDL2Q53FV1 153 aa7.43□□□□□ -1.22
SNX1-204ENST00000559061 TOMM6Q96B49 74 aa7.43□□□□□ -1.22
SNX1-204ENST00000559061 IGLV5-52A0A0A0MRZ9 124 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 TRAV13-1A0A0B4J241 112 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 EREGO14944 169 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 LINC00310P59036 64 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 TMEM18Q96B42 140 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 AMELXQ99217 191 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 FAM30AQ9NZY2 134 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
SNX1-204ENST00000559061 FAT1Q14517 4588 aa7.41□□□□□ -1.22
SNX1-204ENST00000559061 TRGC2P03986 189 aa7.41□□□□□ -1.22
SNX1-204ENST00000559061 DGAT2L7PQ6IED9 249 aa7.41□□□□□ -1.22
SNX1-204ENST00000559061 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
SNX1-204ENST00000559061 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
SNX1-204ENST00000559061 GCSHP23434 173 aa7.4□□□□□ -1.22
SNX1-204ENST00000559061 XGP55808 180 aa7.4□□□□□ -1.22
SNX1-204ENST00000559061 COX6A2Q02221 97 aa7.4□□□□□ -1.22
SNX1-204ENST00000559061 Q6ZSA8 131 aa7.4□□□□□ -1.22
SNX1-204ENST00000559061 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
SNX1-204ENST00000559061 GVQW2A0A096LPI5 108 aaPredicted RBP7.39□□□□□ -1.23
SNX1-204ENST00000559061 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 UBE2D1P51668 147 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 HAMPP81172 84 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 SS18Q15532 418 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 HIGD2BQ4VC39 106 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 TIMM17AQ99595 171 aa7.39□□□□□ -1.23
SNX1-204ENST00000559061 IFITM10A6NMD0 228 aa7.38□□□□□ -1.23
SNX1-204ENST00000559061 C1orf196B1AJZ1 125 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms