RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 GTF2H5Q6ZYL4 71 aa11.22□□□□□ -0.61
CDC42BPB-204ENST00000559043 DNAJC30Q96LL9 226 aa11.22□□□□□ -0.61
CDC42BPB-204ENST00000559043 A0A0J9YWU9 116 aa11.21□□□□□ -0.61
CDC42BPB-204ENST00000559043 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
CDC42BPB-204ENST00000559043 NOP10Q9NPE3 64 aaKnown RBP11.21□□□□□ -0.61
CDC42BPB-204ENST00000559043 NHP2Q9NX24 153 aaKnown RBP11.21□□□□□ -0.61
CDC42BPB-204ENST00000559043 Q9UF83 564 aa11.21□□□□□ -0.61
CDC42BPB-204ENST00000559043 K7EP34 96 aa11.21□□□□□ -0.62
CDC42BPB-204ENST00000559043 CRYBA4P53673 196 aa11.21□□□□□ -0.62
CDC42BPB-204ENST00000559043 TMEM170BQ5T4T1 132 aa11.21□□□□□ -0.62
CDC42BPB-204ENST00000559043 FAM104AQ969W3 186 aa11.21□□□□□ -0.62
CDC42BPB-204ENST00000559043 NAA38Q9BRA0 125 aaKnown RBP11.21□□□□□ -0.62
CDC42BPB-204ENST00000559043 CELA1Q9UNI1 258 aa11.21□□□□□ -0.62
CDC42BPB-204ENST00000559043 K7ERJ3 54 aa11.2□□□□□ -0.62
CDC42BPB-204ENST00000559043 A0A1B0GWB2 263 aa11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 PLEKHB2Q96CS7 222 aa11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 AMELXQ99217 191 aa11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 VCX2Q9H322 139 aa11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 CHCHD7Q9BUK0 85 aa11.19□□□□□ -0.62
CDC42BPB-204ENST00000559043 TMEM223A0PJW6 202 aa11.18□□□□□ -0.62
CDC42BPB-204ENST00000559043 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
CDC42BPB-204ENST00000559043 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
CDC42BPB-204ENST00000559043 Q6ZTI0 123 aa11.18□□□□□ -0.62
CDC42BPB-204ENST00000559043 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-204ENST00000559043 GAGE12BA1L429 117 aa11.17□□□□□ -0.62
CDC42BPB-204ENST00000559043 FABP2P12104 132 aa11.17□□□□□ -0.62
CDC42BPB-204ENST00000559043 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
CDC42BPB-204ENST00000559043 A0A0J9YY99 117 aa11.17□□□□□ -0.62
CDC42BPB-204ENST00000559043 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
CDC42BPB-204ENST00000559043 OR5A1Q8NGJ0 315 aa11.17□□□□□ -0.62
CDC42BPB-204ENST00000559043 SPANXA1Q9NS26 97 aa11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 J3QQQ9 107 aa11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 LEPROTO15243 131 aa11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 UBE2D4Q9Y2X8 147 aa11.16□□□□□ -0.62
CDC42BPB-204ENST00000559043 IGLL5B9A064 214 aa11.15□□□□□ -0.62
CDC42BPB-204ENST00000559043 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
CDC42BPB-204ENST00000559043 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPB-204ENST00000559043 TRGV1A0A0A0MS02 117 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 GAGE7O76087 117 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 DEFB130BP0DP73 79 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 DEFB130AP0DP74 79 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 COTL1Q14019 142 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 SLC25A29Q8N8R3 303 aa11.14□□□□□ -0.63
CDC42BPB-204ENST00000559043 SPART-AS1P0CW21 52 aa11.13□□□□□ -0.63
CDC42BPB-204ENST00000559043 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
CDC42BPB-204ENST00000559043 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDC42BPB-204ENST00000559043 TRAV4A0A0B4J268 109 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 A6NJY4 79 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 LYRM9A8MSI8 78 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 ZNF479Q96JC4 524 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 IGHV3-38A0A0C4DH36 116 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 UBE2D1P51668 147 aa11.12□□□□□ -0.63
CDC42BPB-204ENST00000559043 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-204ENST00000559043 IGKV2-29A2NJV5 120 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-204ENST00000559043 C11orf45Q8TAV5 145 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 TINCRA0A1B0GVN0 87 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 K7EQD1 137 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
CDC42BPB-204ENST00000559043 DAD1P61803 113 aa11.09□□□□□ -0.63
CDC42BPB-204ENST00000559043 RBX1P62877 108 aa11.09□□□□□ -0.63
CDC42BPB-204ENST00000559043 Q6ZTC4 211 aa11.09□□□□□ -0.63
CDC42BPB-204ENST00000559043 RNASE13Q5GAN3 156 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-204ENST00000559043 Q6ZUT4 128 aa11.08□□□□□ -0.64
CDC42BPB-204ENST00000559043 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
CDC42BPB-204ENST00000559043 RPL36AP83881 106 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-204ENST00000559043 RPL36ALQ969Q0 106 aaKnown RBP11.08□□□□□ -0.64
CDC42BPB-204ENST00000559043 IGHV3-30-3P0DP02 117 aa11.07□□□□□ -0.64
CDC42BPB-204ENST00000559043 DAZ4Q86SG3 579 aaKnown RBP11.07□□□□□ -0.64
CDC42BPB-204ENST00000559043 DAZ3Q9NR90 486 aaKnown RBP11.07□□□□□ -0.64
CDC42BPB-204ENST00000559043 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
CDC42BPB-204ENST00000559043 CIDEAO60543 219 aa11.07□□□□□ -0.64
CDC42BPB-204ENST00000559043 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
CDC42BPB-204ENST00000559043 UBE2D3P61077 147 aa11.06□□□□□ -0.64
CDC42BPB-204ENST00000559043 UBE2D2P62837 147 aa11.06□□□□□ -0.64
CDC42BPB-204ENST00000559043 DNAH7Q8WXX0 4024 aa11.06□□□□□ -0.64
CDC42BPB-204ENST00000559043 C10orf126Q8N4M7 172 aa11.05□□□□□ -0.64
CDC42BPB-204ENST00000559043 TEX48A0A1B0GUV7 120 aa11.05□□□□□ -0.64
CDC42BPB-204ENST00000559043 FHL2Q14192 279 aa11.05□□□□□ -0.64
CDC42BPB-204ENST00000559043 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
CDC42BPB-204ENST00000559043 PGPEP1Q9NXJ5 209 aa11.05□□□□□ -0.64
CDC42BPB-204ENST00000559043 CSDC2Q9Y534 153 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms