RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 FOXI1Q12951 378 aa8.15□□□□□ -1.1
RABGGTA-207ENST00000558936 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
RABGGTA-207ENST00000558936 TMEM136Q6ZRR5 245 aa8.15□□□□□ -1.1
RABGGTA-207ENST00000558936 ATP5L2Q7Z4Y8 100 aa8.15□□□□□ -1.1
RABGGTA-207ENST00000558936 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
RABGGTA-207ENST00000558936 SEC11CQ9BY50 192 aa8.15□□□□□ -1.1
RABGGTA-207ENST00000558936 GAGE12HA6NDE8 117 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 PRSS47A8MTI9 375 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 PPP1R2P9O14990 202 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 TCAPO15273 167 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 MT-ND4LP03901 98 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 CKS2P33552 79 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 RNASEKQ6P5S7 137 aaKnown RBP8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 CHCHD10Q8WYQ3 142 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 C20orf78Q9BR46 151 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 SMIM2Q9BVW6 85 aa8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 CARHSP1Q9Y2V2 147 aaKnown RBP8.14□□□□□ -1.11
RABGGTA-207ENST00000558936 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
RABGGTA-207ENST00000558936 PPP1R17O96001 155 aa8.13□□□□□ -1.11
RABGGTA-207ENST00000558936 OR5A1Q8NGJ0 315 aa8.13□□□□□ -1.11
RABGGTA-207ENST00000558936 C7orf77A4D0Y5 90 aa8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 ZNF25P17030 456 aaPredicted RBP8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 Q5VSD8 79 aa8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 Q6ZUT4 128 aa8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.12□□□□□ -1.11
RABGGTA-207ENST00000558936 S100A8P05109 93 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 DGAT2L7PQ6IED9 249 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 C9orf163Q8N9P6 203 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 PRELID3AQ96N28 172 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 IMMP2LQ96T52 175 aa8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 CSDC2Q9Y534 153 aaKnown RBP8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 SRRM2Q9UQ35 2752 aaKnown RBP8.11□□□□□ -1.11
RABGGTA-207ENST00000558936 PHOX2AO14813 284 aa8.1□□□□□ -1.11
RABGGTA-207ENST00000558936 KIAA1644Q3SXP7 199 aa8.1□□□□□ -1.11
RABGGTA-207ENST00000558936 ORMDL3Q8N138 153 aa8.1□□□□□ -1.11
RABGGTA-207ENST00000558936 LINC00526Q96FQ7 95 aa8.1□□□□□ -1.11
RABGGTA-207ENST00000558936 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
RABGGTA-207ENST00000558936 BTF3L4Q96K17 158 aa8.1□□□□□ -1.11
RABGGTA-207ENST00000558936 CCL25O15444 150 aa8.09□□□□□ -1.11
RABGGTA-207ENST00000558936 FCER1GP30273 86 aa8.09□□□□□ -1.11
RABGGTA-207ENST00000558936 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
RABGGTA-207ENST00000558936 ZC2HC1BQ5TFG8 222 aa8.09□□□□□ -1.11
RABGGTA-207ENST00000558936 CIRBP-AS1Q8TBR5 109 aa8.09□□□□□ -1.11
RABGGTA-207ENST00000558936 HERC1Q15751 4861 aa8.09□□□□□ -1.11
RABGGTA-207ENST00000558936 LOC389332A0A1B0GUA5 103 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 hDV102S1A0JD36 115 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 PPBPP02775 128 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 XCL1P47992 114 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 HIGD2BQ4VC39 106 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 YPEL4Q96NS1 127 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 KIR2DL4Q99706 377 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 CHAC1Q9BUX1 264 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 TIMM21Q9BVV7 248 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
RABGGTA-207ENST00000558936 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
RABGGTA-207ENST00000558936 INAFM2P0DMQ5 153 aa8.07□□□□□ -1.12
RABGGTA-207ENST00000558936 LINC00173Q6ZV60 143 aa8.07□□□□□ -1.12
RABGGTA-207ENST00000558936 GVQW2A0A096LPI5 108 aaPredicted RBP8.06□□□□□ -1.12
RABGGTA-207ENST00000558936 CHTF8P0CG12 524 aa8.06□□□□□ -1.12
RABGGTA-207ENST00000558936 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-207ENST00000558936 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
RABGGTA-207ENST00000558936 IGLV4-3A0A075B6K6 122 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 IFI27P40305 119 aaPredicted RBP8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 COX6A2Q02221 97 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 CFAP161Q6P656 301 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 CD164L2Q6UWJ8 174 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 Q8N8P6 123 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
RABGGTA-207ENST00000558936 TGIF2-C20orf24A0A0A6YYL0 155 aa8.04□□□□□ -1.12
RABGGTA-207ENST00000558936 SS18Q15532 418 aa8.04□□□□□ -1.12
RABGGTA-207ENST00000558936 PRSS3P2Q8NHM4 247 aa8.04□□□□□ -1.12
RABGGTA-207ENST00000558936 ALKBH7Q9BT30 221 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-207ENST00000558936 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
RABGGTA-207ENST00000558936 TRAV9-1A0A075B6T8 112 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 IGHV3OR16-9A0A0B4J2B5 98 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 MRPS36P82909 103 aaKnown RBP8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 TMEM18Q96B42 140 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 LAMTOR2Q9Y2Q5 125 aa8.03□□□□□ -1.12
RABGGTA-207ENST00000558936 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 LINC01546A6NGU7 62 aa8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 HNRNPA3P51991 378 aaKnown RBP8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 C5orf38Q86SI9 138 aa8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 SLC7A5P1Q8MH63 180 aa8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 GNB1LQ9BYB4 327 aa8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 PYGO1Q9Y3Y4 419 aa8.02□□□□□ -1.13
RABGGTA-207ENST00000558936 IGHV3-64A0A075B6Q5 118 aa8.01□□□□□ -1.13
RABGGTA-207ENST00000558936 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
RABGGTA-207ENST00000558936 APOC3P02656 99 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms