RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
XRCC3-217ENST00000556980 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
XRCC3-217ENST00000556980 C20orf78Q9BR46 151 aa11.64□□□□□ -0.55
XRCC3-217ENST00000556980 D6R8Y8 96 aa11.63□□□□□ -0.55
XRCC3-217ENST00000556980 SMAGPQ0VAQ4 97 aa11.63□□□□□ -0.55
XRCC3-217ENST00000556980 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
XRCC3-217ENST00000556980 TRBV24-1A0A075B6N3 115 aa11.62□□□□□ -0.55
XRCC3-217ENST00000556980 TNFRSF6BO95407 300 aa11.62□□□□□ -0.55
XRCC3-217ENST00000556980 CNBPP62633 177 aaKnown RBP11.62□□□□□ -0.55
XRCC3-217ENST00000556980 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
XRCC3-217ENST00000556980 ANAPC16Q96DE5 110 aa11.62□□□□□ -0.55
XRCC3-217ENST00000556980 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-217ENST00000556980 LINC00959A0A1B0GUT2 108 aa11.61□□□□□ -0.55
XRCC3-217ENST00000556980 PPBPP02775 128 aa11.61□□□□□ -0.55
XRCC3-217ENST00000556980 XCL1P47992 114 aa11.61□□□□□ -0.55
XRCC3-217ENST00000556980 ZNF664Q8N3J9 261 aa11.61□□□□□ -0.55
XRCC3-217ENST00000556980 CIRBP-AS1Q8TBR5 109 aa11.61□□□□□ -0.55
XRCC3-217ENST00000556980 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
XRCC3-217ENST00000556980 TCAPO15273 167 aa11.6□□□□□ -0.55
XRCC3-217ENST00000556980 CCL25O15444 150 aa11.6□□□□□ -0.55
XRCC3-217ENST00000556980 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
XRCC3-217ENST00000556980 RPL32P62910 135 aaKnown RBP11.6□□□□□ -0.55
XRCC3-217ENST00000556980 SS18Q15532 418 aa11.6□□□□□ -0.55
XRCC3-217ENST00000556980 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
XRCC3-217ENST00000556980 TMEM18Q96B42 140 aa11.6□□□□□ -0.55
XRCC3-217ENST00000556980 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
XRCC3-217ENST00000556980 NPYP01303 97 aa11.59□□□□□ -0.55
XRCC3-217ENST00000556980 IFITM2Q01629 132 aa11.59□□□□□ -0.55
XRCC3-217ENST00000556980 FOXI1Q12951 378 aa11.59□□□□□ -0.55
XRCC3-217ENST00000556980 HIGD2BQ4VC39 106 aa11.59□□□□□ -0.55
XRCC3-217ENST00000556980 ORMDL3Q8N138 153 aa11.59□□□□□ -0.55
XRCC3-217ENST00000556980 IGHV3-64A0A075B6Q5 118 aa11.58□□□□□ -0.56
XRCC3-217ENST00000556980 PHOX2AO14813 284 aa11.58□□□□□ -0.56
XRCC3-217ENST00000556980 UQCC3Q6UW78 93 aa11.58□□□□□ -0.56
XRCC3-217ENST00000556980 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
XRCC3-217ENST00000556980 CSDC2Q9Y534 153 aaKnown RBP11.58□□□□□ -0.56
XRCC3-217ENST00000556980 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
XRCC3-217ENST00000556980 FAT1Q14517 4588 aa11.57□□□□□ -0.56
XRCC3-217ENST00000556980 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
XRCC3-217ENST00000556980 SLPIP03973 132 aa11.56□□□□□ -0.56
XRCC3-217ENST00000556980 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
XRCC3-217ENST00000556980 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
XRCC3-217ENST00000556980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.56□□□□□ -0.56
XRCC3-217ENST00000556980 SRRM2Q9UQ35 2752 aaKnown RBP11.56□□□□□ -0.56
XRCC3-217ENST00000556980 RNASE13Q5GAN3 156 aaKnown RBP11.55□□□□□ -0.56
XRCC3-217ENST00000556980 CD164L2Q6UWJ8 174 aa11.55□□□□□ -0.56
XRCC3-217ENST00000556980 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
XRCC3-217ENST00000556980 TMEM218A2RU14 115 aa11.54□□□□□ -0.56
XRCC3-217ENST00000556980 C1orf196B1AJZ1 125 aa11.54□□□□□ -0.56
XRCC3-217ENST00000556980 ADCYAP1P18509 176 aa11.54□□□□□ -0.56
XRCC3-217ENST00000556980 Q6ZUT4 128 aa11.54□□□□□ -0.56
XRCC3-217ENST00000556980 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
XRCC3-217ENST00000556980 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
XRCC3-217ENST00000556980 RAB5AP20339 215 aa11.53□□□□□ -0.56
XRCC3-217ENST00000556980 RPL39P62891 51 aaKnown RBP11.53□□□□□ -0.56
XRCC3-217ENST00000556980 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
XRCC3-217ENST00000556980 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.57
XRCC3-217ENST00000556980 PANO1I0J062 215 aa11.51□□□□□ -0.57
XRCC3-217ENST00000556980 COMMD7Q86VX2 200 aa11.51□□□□□ -0.57
XRCC3-217ENST00000556980 DPH3Q96FX2 82 aa11.51□□□□□ -0.57
XRCC3-217ENST00000556980 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
XRCC3-217ENST00000556980 COX7A2LO14548 114 aa11.5□□□□□ -0.57
XRCC3-217ENST00000556980 MALP21145 153 aa11.5□□□□□ -0.57
XRCC3-217ENST00000556980 CTDSP1Q9GZU7 261 aa11.5□□□□□ -0.57
XRCC3-217ENST00000556980 MAP1LC3AQ9H492 121 aa11.5□□□□□ -0.57
XRCC3-217ENST00000556980 DNAH8Q96JB1 4490 aa11.5□□□□□ -0.57
XRCC3-217ENST00000556980 LOC389332A0A1B0GUA5 103 aa11.49□□□□□ -0.57
XRCC3-217ENST00000556980 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
XRCC3-217ENST00000556980 SEC11CQ9BY50 192 aa11.49□□□□□ -0.57
XRCC3-217ENST00000556980 ZNF561-AS1K7EIQ3 104 aa11.48□□□□□ -0.57
XRCC3-217ENST00000556980 COX6A2Q02221 97 aa11.48□□□□□ -0.57
XRCC3-217ENST00000556980 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
XRCC3-217ENST00000556980 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
XRCC3-217ENST00000556980 PRSS47A8MTI9 375 aa11.47□□□□□ -0.57
XRCC3-217ENST00000556980 MRPS36P82909 103 aaKnown RBP11.47□□□□□ -0.57
XRCC3-217ENST00000556980 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
XRCC3-217ENST00000556980 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-217ENST00000556980 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
XRCC3-217ENST00000556980 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.57
XRCC3-217ENST00000556980 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
XRCC3-217ENST00000556980 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
XRCC3-217ENST00000556980 VPS13BQ7Z7G8 4022 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 S100PP25815 95 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 C5orf38Q86SI9 138 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 Q8N8P6 123 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 FAM104AQ969W3 186 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
XRCC3-217ENST00000556980 A0A087WYN8 130 aa11.44□□□□□ -0.58
XRCC3-217ENST00000556980 APOMO95445 188 aa11.44□□□□□ -0.58
XRCC3-217ENST00000556980 SYCNQ0VAF6 134 aa11.44□□□□□ -0.58
XRCC3-217ENST00000556980 IGLV4-69A0A075B6H9 119 aa11.43□□□□□ -0.58
XRCC3-217ENST00000556980 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
XRCC3-217ENST00000556980 KRTAP10-4P60372 401 aaPredicted RBP11.43□□□□□ -0.58
XRCC3-217ENST00000556980 MAJINQ3KP22 176 aa11.43□□□□□ -0.58
XRCC3-217ENST00000556980 PYGO1Q9Y3Y4 419 aa11.43□□□□□ -0.58
XRCC3-217ENST00000556980 FLG2Q5D862 2391 aaPredicted RBP11.43□□□□□ -0.58
XRCC3-217ENST00000556980 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
XRCC3-217ENST00000556980 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms