RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 IGLV4-3A0A075B6K6 122 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 A0A087WZ39 114 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 G3V4G9 280 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 CDKN2A-AS1Q9UH64 79 aa12.66□□□□□ -0.38
PTPN21-208ENST00000556564 LELP1Q5T871 98 aa12.66□□□□□ -0.38
PTPN21-208ENST00000556564 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
PTPN21-208ENST00000556564 RBX1P62877 108 aa12.65□□□□□ -0.38
PTPN21-208ENST00000556564 LINC00526Q96FQ7 95 aa12.65□□□□□ -0.38
PTPN21-208ENST00000556564 F8W1H4 67 aa12.65□□□□□ -0.38
PTPN21-208ENST00000556564 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 ETDBQ3ZM63 59 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTPN21-208ENST00000556564 PCP4P48539 62 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 H0YGX0 51 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
PTPN21-208ENST00000556564 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
PTPN21-208ENST00000556564 MIAQ16674 131 aa12.63□□□□□ -0.39
PTPN21-208ENST00000556564 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
PTPN21-208ENST00000556564 PCSK5Q92824 1860 aa12.63□□□□□ -0.39
PTPN21-208ENST00000556564 TSHBP01222 138 aa12.62□□□□□ -0.39
PTPN21-208ENST00000556564 U3KQK5 164 aa12.62□□□□□ -0.39
PTPN21-208ENST00000556564 FAM19A1Q7Z5A9 133 aa12.62□□□□□ -0.39
PTPN21-208ENST00000556564 MRPS12O15235 138 aaKnown RBP12.61□□□□□ -0.39
PTPN21-208ENST00000556564 FXYD2P54710 66 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 XAGE1AQ9HD64 81 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 COX7BP24311 80 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 MRGPRG-AS1Q2M3A8 158 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 Q6ZTC4 211 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 TRACP01848 142 aa12.6□□□□□ -0.39
PTPN21-208ENST00000556564 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
PTPN21-208ENST00000556564 A0A0J9YXY3 114 aa12.6□□□□□ -0.39
PTPN21-208ENST00000556564 ZNF580Q9UK33 172 aa12.58□□□□□ -0.4
PTPN21-208ENST00000556564 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
PTPN21-208ENST00000556564 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.4
PTPN21-208ENST00000556564 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
PTPN21-208ENST00000556564 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
PTPN21-208ENST00000556564 TRBV27A0A0K0K1C4 114 aa12.57□□□□□ -0.4
PTPN21-208ENST00000556564 NRACQ8N912 160 aa12.57□□□□□ -0.4
PTPN21-208ENST00000556564 A0A096LNI7 61 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 K7EP13 123 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 GAS8-AS1O95177 125 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 ABCA2Q9BZC7 2435 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 A8MZ25 164 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 KRTAP24-1Q3LI83 254 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 CD164L2Q6UWJ8 174 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
PTPN21-208ENST00000556564 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 UBE2D3P61077 147 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 UBE2D2P62837 147 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 Q8N2B8 174 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 ANKRD29Q8N6D5 301 aa12.53□□□□□ -0.4
PTPN21-208ENST00000556564 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
PTPN21-208ENST00000556564 DSCAML1Q8TD84 2053 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 IGKV2-28A0A075B6P5 120 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 IGKV2D-28P01615 120 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 NPSP0C0P6 89 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 NDUFB1O75438 58 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
PTPN21-208ENST00000556564 COL27A1Q8IZC6 1860 aaPredicted RBP12.5□□□□□ -0.41
PTPN21-208ENST00000556564 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
PTPN21-208ENST00000556564 PYGO1Q9Y3Y4 419 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 H3BQ85 93 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 FHL2Q14192 279 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 IGLV4-69A0A075B6H9 119 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 IBA57-AS1B1ANH7 110 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 NREPQ16612 68 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 RNASE8Q8TDE3 154 aaKnown RBP12.49□□□□□ -0.41
PTPN21-208ENST00000556564 LINC01620Q4KN68 170 aa12.48□□□□□ -0.41
PTPN21-208ENST00000556564 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
PTPN21-208ENST00000556564 SPATA12Q7Z6I5 190 aa12.47□□□□□ -0.41
PTPN21-208ENST00000556564 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.41
PTPN21-208ENST00000556564 RPL37AP8A6NKH3 93 aa12.46□□□□□ -0.41
PTPN21-208ENST00000556564 FOXI1Q12951 378 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 UBE2D1P51668 147 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 RBM3P98179 157 aaKnown RBP12.45□□□□□ -0.42
PTPN21-208ENST00000556564 H0Y9J4 135 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 FHL3Q13643 280 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 TMEM256-PLSCR3K7ERE1 68 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 LINC00308Q8TCZ7 52 aa12.44□□□□□ -0.42
PTPN21-208ENST00000556564 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
PTPN21-208ENST00000556564 SPANXDQ9BXN6 97 aa12.44□□□□□ -0.42
PTPN21-208ENST00000556564 TET2Q6N021 2002 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 IGKV2D-26A0A0A0MRZ7 120 aa12.43□□□□□ -0.42
PTPN21-208ENST00000556564 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 MRPS36P82909 103 aaKnown RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 MAPKAPK5-AS1Q8N8E1 139 aa12.43□□□□□ -0.42
PTPN21-208ENST00000556564 PPDPFQ9H3Y8 114 aa12.43□□□□□ -0.42
PTPN21-208ENST00000556564 SPANXB1Q9NS25 103 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 TP73-AS1Q9UF72 201 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 CHD8Q9HCK8 2581 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 ZNF462Q96JM2 2506 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 IGLV5-52A0A0A0MRZ9 124 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 SLPIP03973 132 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms