RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 IGLV4-3A0A075B6K6 122 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 A0A087WZ39 114 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 G3V4G9 280 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
PTPN21-208ENST00000556564 CDKN2A-AS1Q9UH64 79 aa12.66□□□□□ -0.38
PTPN21-208ENST00000556564 LELP1Q5T871 98 aa12.66□□□□□ -0.38
PTPN21-208ENST00000556564 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
PTPN21-208ENST00000556564 RBX1P62877 108 aa12.65□□□□□ -0.38
PTPN21-208ENST00000556564 LINC00526Q96FQ7 95 aa12.65□□□□□ -0.38
PTPN21-208ENST00000556564 F8W1H4 67 aa12.65□□□□□ -0.38
PTPN21-208ENST00000556564 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 ETDBQ3ZM63 59 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTPN21-208ENST00000556564 PCP4P48539 62 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 PPDPFLQ8WWR9 84 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 H0YGX0 51 aa12.64□□□□□ -0.39
PTPN21-208ENST00000556564 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
PTPN21-208ENST00000556564 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
PTPN21-208ENST00000556564 MIAQ16674 131 aa12.63□□□□□ -0.39
PTPN21-208ENST00000556564 TLN1Q9Y490 2541 aaKnown RBP12.63□□□□□ -0.39
PTPN21-208ENST00000556564 PCSK5Q92824 1860 aa12.63□□□□□ -0.39
PTPN21-208ENST00000556564 TSHBP01222 138 aa12.62□□□□□ -0.39
PTPN21-208ENST00000556564 U3KQK5 164 aa12.62□□□□□ -0.39
PTPN21-208ENST00000556564 FAM19A1Q7Z5A9 133 aa12.62□□□□□ -0.39
PTPN21-208ENST00000556564 MRPS12O15235 138 aaKnown RBP12.61□□□□□ -0.39
PTPN21-208ENST00000556564 FXYD2P54710 66 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 XAGE1AQ9HD64 81 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 COX7BP24311 80 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 MRGPRG-AS1Q2M3A8 158 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 Q6ZTC4 211 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 CLEC2BQ92478 149 aa12.61□□□□□ -0.39
PTPN21-208ENST00000556564 TRACP01848 142 aa12.6□□□□□ -0.39
PTPN21-208ENST00000556564 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
PTPN21-208ENST00000556564 A0A0J9YXY3 114 aa12.6□□□□□ -0.39
PTPN21-208ENST00000556564 ZNF580Q9UK33 172 aa12.58□□□□□ -0.4
PTPN21-208ENST00000556564 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
PTPN21-208ENST00000556564 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.4
PTPN21-208ENST00000556564 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
PTPN21-208ENST00000556564 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
PTPN21-208ENST00000556564 TRBV27A0A0K0K1C4 114 aa12.57□□□□□ -0.4
PTPN21-208ENST00000556564 NRACQ8N912 160 aa12.57□□□□□ -0.4
PTPN21-208ENST00000556564 A0A096LNI7 61 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 K7EP13 123 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 GAS8-AS1O95177 125 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
PTPN21-208ENST00000556564 ABCA2Q9BZC7 2435 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 A8MZ25 164 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 KRTAP24-1Q3LI83 254 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 CD164L2Q6UWJ8 174 aa12.55□□□□□ -0.4
PTPN21-208ENST00000556564 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
PTPN21-208ENST00000556564 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 UBE2D3P61077 147 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 UBE2D2P62837 147 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 Q8N2B8 174 aa12.54□□□□□ -0.4
PTPN21-208ENST00000556564 ANKRD29Q8N6D5 301 aa12.53□□□□□ -0.4
PTPN21-208ENST00000556564 PIK3CD-AS1Q5SR53 167 aa12.53□□□□□ -0.4
PTPN21-208ENST00000556564 DSCAML1Q8TD84 2053 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 IGKV2-28A0A075B6P5 120 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 IGKV2D-28P01615 120 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 NPSP0C0P6 89 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 NDUFB1O75438 58 aa12.51□□□□□ -0.41
PTPN21-208ENST00000556564 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
PTPN21-208ENST00000556564 COL27A1Q8IZC6 1860 aaPredicted RBP12.5□□□□□ -0.41
PTPN21-208ENST00000556564 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
PTPN21-208ENST00000556564 PYGO1Q9Y3Y4 419 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 H3BQ85 93 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 FHL2Q14192 279 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 IGLV4-69A0A075B6H9 119 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 IBA57-AS1B1ANH7 110 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 NREPQ16612 68 aa12.49□□□□□ -0.41
PTPN21-208ENST00000556564 RNASE8Q8TDE3 154 aaKnown RBP12.49□□□□□ -0.41
PTPN21-208ENST00000556564 LINC01620Q4KN68 170 aa12.48□□□□□ -0.41
PTPN21-208ENST00000556564 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
PTPN21-208ENST00000556564 SPATA12Q7Z6I5 190 aa12.47□□□□□ -0.41
PTPN21-208ENST00000556564 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.41
PTPN21-208ENST00000556564 RPL37AP8A6NKH3 93 aa12.46□□□□□ -0.41
PTPN21-208ENST00000556564 FOXI1Q12951 378 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 UBE2D1P51668 147 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 RBM3P98179 157 aaKnown RBP12.45□□□□□ -0.42
PTPN21-208ENST00000556564 H0Y9J4 135 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 FHL3Q13643 280 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 TMEM256-PLSCR3K7ERE1 68 aa12.45□□□□□ -0.42
PTPN21-208ENST00000556564 LINC00308Q8TCZ7 52 aa12.44□□□□□ -0.42
PTPN21-208ENST00000556564 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
PTPN21-208ENST00000556564 SPANXDQ9BXN6 97 aa12.44□□□□□ -0.42
PTPN21-208ENST00000556564 TET2Q6N021 2002 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 IGKV2D-26A0A0A0MRZ7 120 aa12.43□□□□□ -0.42
PTPN21-208ENST00000556564 NHLRC4P0CG21 123 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 MRPS36P82909 103 aaKnown RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 MAPKAPK5-AS1Q8N8E1 139 aa12.43□□□□□ -0.42
PTPN21-208ENST00000556564 PPDPFQ9H3Y8 114 aa12.43□□□□□ -0.42
PTPN21-208ENST00000556564 SPANXB1Q9NS25 103 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-208ENST00000556564 TP73-AS1Q9UF72 201 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 CHD8Q9HCK8 2581 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 ZNF462Q96JM2 2506 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 IGLV5-52A0A0A0MRZ9 124 aa12.42□□□□□ -0.42
PTPN21-208ENST00000556564 SLPIP03973 132 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms