RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RAB4AP20338 218 aa14.27□□□□□ -0.13
ACTN1-220ENST00000556433 C7orf33Q8WU49 177 aa14.27□□□□□ -0.13
ACTN1-220ENST00000556433 MRAP2Q96G30 205 aa14.27□□□□□ -0.13
ACTN1-220ENST00000556433 FAM210AQ96ND0 272 aa14.27□□□□□ -0.13
ACTN1-220ENST00000556433 OSTCQ9NRP0 149 aa14.27□□□□□ -0.13
ACTN1-220ENST00000556433 PHOX2AO14813 284 aa14.26□□□□□ -0.13
ACTN1-220ENST00000556433 CCL25O15444 150 aa14.26□□□□□ -0.13
ACTN1-220ENST00000556433 POLR2KP53803 58 aaKnown RBP14.26□□□□□ -0.13
ACTN1-220ENST00000556433 AMN1Q8IY45 258 aa14.25□□□□□ -0.13
ACTN1-220ENST00000556433 IGHV1-58A0A0C4DH39 117 aa14.24□□□□□ -0.13
ACTN1-220ENST00000556433 SRP19P09132 144 aaKnown RBP14.24□□□□□ -0.13
ACTN1-220ENST00000556433 MT1HL1P0DM35 61 aa14.24□□□□□ -0.13
ACTN1-220ENST00000556433 SS18Q15532 418 aa14.24□□□□□ -0.13
ACTN1-220ENST00000556433 STPG4Q8N801 248 aa14.24□□□□□ -0.13
ACTN1-220ENST00000556433 CDC42SE2Q9NRR3 84 aa14.24□□□□□ -0.13
ACTN1-220ENST00000556433 TRBV27A0A0K0K1C4 114 aa14.23□□□□□ -0.13
ACTN1-220ENST00000556433 MRPL52Q86TS9 123 aaKnown RBP14.23□□□□□ -0.13
ACTN1-220ENST00000556433 LINC00526Q96FQ7 95 aa14.23□□□□□ -0.13
ACTN1-220ENST00000556433 RIGQ13278 110 aa14.22□□□□□ -0.13
ACTN1-220ENST00000556433 ZNF664Q8N3J9 261 aa14.22□□□□□ -0.13
ACTN1-220ENST00000556433 A0A096LNI7 61 aa14.21□□□□□ -0.13
ACTN1-220ENST00000556433 C7orf77A4D0Y5 90 aa14.21□□□□□ -0.13
ACTN1-220ENST00000556433 SMKR1H3BMG3 65 aa14.21□□□□□ -0.13
ACTN1-220ENST00000556433 VCYO14598 125 aa14.21□□□□□ -0.13
ACTN1-220ENST00000556433 V9GYV3 84 aa14.21□□□□□ -0.13
ACTN1-220ENST00000556433 CD164L2Q6UWJ8 174 aa14.2□□□□□ -0.14
ACTN1-220ENST00000556433 NUP35Q8NFH5 326 aa14.2□□□□□ -0.14
ACTN1-220ENST00000556433 FCER1GP30273 86 aa14.19□□□□□ -0.14
ACTN1-220ENST00000556433 CARD19Q96LW7 228 aa14.19□□□□□ -0.14
ACTN1-220ENST00000556433 ZNF561-AS1K7EIQ3 104 aa14.18□□□□□ -0.14
ACTN1-220ENST00000556433 PPP1R17O96001 155 aa14.18□□□□□ -0.14
ACTN1-220ENST00000556433 TMEM241Q24JQ0 296 aa14.18□□□□□ -0.14
ACTN1-220ENST00000556433 LINC00474Q9P2X8 69 aa14.18□□□□□ -0.14
ACTN1-220ENST00000556433 PKIGQ9Y2B9 76 aa14.18□□□□□ -0.14
ACTN1-220ENST00000556433 NRACQ8N912 160 aa14.17□□□□□ -0.14
ACTN1-220ENST00000556433 ISOC2Q96AB3 205 aa14.17□□□□□ -0.14
ACTN1-220ENST00000556433 SUMO2P61956 95 aaKnown RBP14.16□□□□□ -0.14
ACTN1-220ENST00000556433 SYCNQ0VAF6 134 aa14.16□□□□□ -0.14
ACTN1-220ENST00000556433 NAT8BQ9UHF3 227 aa14.16□□□□□ -0.14
ACTN1-220ENST00000556433 RPL23P62829 140 aaKnown RBP14.15□□□□□ -0.14
ACTN1-220ENST00000556433 PRR3P79522 188 aaKnown RBP14.15□□□□□ -0.14
ACTN1-220ENST00000556433 FAM74A3Q4VXF1 159 aa14.15□□□□□ -0.14
ACTN1-220ENST00000556433 KIR2DL4Q99706 377 aa14.15□□□□□ -0.14
ACTN1-220ENST00000556433 C1orf196B1AJZ1 125 aa14.14□□□□□ -0.15
ACTN1-220ENST00000556433 SMAGPQ0VAQ4 97 aa14.14□□□□□ -0.15
ACTN1-220ENST00000556433 CSDC2Q9Y534 153 aaKnown RBP14.14□□□□□ -0.15
ACTN1-220ENST00000556433 UBR4Q5T4S7 5183 aa14.14□□□□□ -0.15
ACTN1-220ENST00000556433 MALP21145 153 aa14.13□□□□□ -0.15
ACTN1-220ENST00000556433 ADIRFQ15847 76 aa14.13□□□□□ -0.15
ACTN1-220ENST00000556433 UBE2D4Q9Y2X8 147 aa14.13□□□□□ -0.15
ACTN1-220ENST00000556433 PPP1R2P9O14990 202 aa14.12□□□□□ -0.15
ACTN1-220ENST00000556433 CAMPP49913 170 aa14.12□□□□□ -0.15
ACTN1-220ENST00000556433 MRPL51Q4U2R6 128 aaKnown RBP14.12□□□□□ -0.15
ACTN1-220ENST00000556433 RNASE13Q5GAN3 156 aaKnown RBP14.12□□□□□ -0.15
ACTN1-220ENST00000556433 FAM104BQ5XKR9 115 aa14.12□□□□□ -0.15
ACTN1-220ENST00000556433 IGLV4-69A0A075B6H9 119 aa14.11□□□□□ -0.15
ACTN1-220ENST00000556433 COX7A2LO14548 114 aa14.11□□□□□ -0.15
ACTN1-220ENST00000556433 NAT8Q9UHE5 227 aa14.11□□□□□ -0.15
ACTN1-220ENST00000556433 TRAV13-1A0A0B4J241 112 aa14.1□□□□□ -0.15
ACTN1-220ENST00000556433 C9JQL5 133 aa14.1□□□□□ -0.15
ACTN1-220ENST00000556433 SMIM27A0A1W2PRY6 76 aa14.09□□□□□ -0.15
ACTN1-220ENST00000556433 TMEM18Q96B42 140 aa14.09□□□□□ -0.15
ACTN1-220ENST00000556433 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.16
ACTN1-220ENST00000556433 LINC00862A6NCI5 91 aa14.08□□□□□ -0.16
ACTN1-220ENST00000556433 GAGE2BQ13066 116 aa14.08□□□□□ -0.16
ACTN1-220ENST00000556433 LINC01600Q96MT4 127 aa14.08□□□□□ -0.16
ACTN1-220ENST00000556433 C20orf78Q9BR46 151 aa14.08□□□□□ -0.16
ACTN1-220ENST00000556433 CKS2P33552 79 aa14.07□□□□□ -0.16
ACTN1-220ENST00000556433 PTTG1IPP53801 180 aa14.07□□□□□ -0.16
ACTN1-220ENST00000556433 Q6ZUT4 128 aa14.07□□□□□ -0.16
ACTN1-220ENST00000556433 C5orf38Q86SI9 138 aa14.07□□□□□ -0.16
ACTN1-220ENST00000556433 CAMK2N2Q96S95 79 aa14.07□□□□□ -0.16
ACTN1-220ENST00000556433 TIMM21Q9BVV7 248 aa14.07□□□□□ -0.16
ACTN1-220ENST00000556433 A0A1B0GW15 77 aa14.06□□□□□ -0.16
ACTN1-220ENST00000556433 SRSF3P84103 164 aaKnown RBP14.06□□□□□ -0.16
ACTN1-220ENST00000556433 PEA15Q15121 130 aa14.06□□□□□ -0.16
ACTN1-220ENST00000556433 TNXBP22105 4242 aa14.05□□□□□ -0.16
ACTN1-220ENST00000556433 TRBV24-1A0A075B6N3 115 aa14.05□□□□□ -0.16
ACTN1-220ENST00000556433 SPINK6Q6UWN8 80 aa14.05□□□□□ -0.16
ACTN1-220ENST00000556433 A0A1B0GVG6 124 aa14.04□□□□□ -0.16
ACTN1-220ENST00000556433 Q6ZRP5 223 aa14.04□□□□□ -0.16
ACTN1-220ENST00000556433 C2orf48Q96LS8 159 aa14.04□□□□□ -0.16
ACTN1-220ENST00000556433 TCAPO15273 167 aa14.03□□□□□ -0.16
ACTN1-220ENST00000556433 TNFRSF6BO95407 300 aa14.03□□□□□ -0.16
ACTN1-220ENST00000556433 APOMO95445 188 aa14.03□□□□□ -0.16
ACTN1-220ENST00000556433 RPL32P62910 135 aaKnown RBP14.03□□□□□ -0.16
ACTN1-220ENST00000556433 RPL39P62891 51 aaKnown RBP14.02□□□□□ -0.17
ACTN1-220ENST00000556433 MRPL54Q6P161 138 aaKnown RBP14.02□□□□□ -0.17
ACTN1-220ENST00000556433 A0A1W2PNN7 141 aa14.01□□□□□ -0.17
ACTN1-220ENST00000556433 S100A8P05109 93 aa14.01□□□□□ -0.17
ACTN1-220ENST00000556433 SRSF9Q13242 221 aaKnown RBP eCLIP14.01□□□□□ -0.17
ACTN1-220ENST00000556433 SMDT1Q9H4I9 107 aa14.01□□□□□ -0.17
ACTN1-220ENST00000556433 D6R8Y8 96 aa14□□□□□ -0.17
ACTN1-220ENST00000556433 F8W036 122 aa14□□□□□ -0.17
ACTN1-220ENST00000556433 HBBP68871 147 aa14□□□□□ -0.17
ACTN1-220ENST00000556433 SPAG11BQ08648 103 aa14□□□□□ -0.17
ACTN1-220ENST00000556433 REG3GQ6UW15 175 aa14□□□□□ -0.17
ACTN1-220ENST00000556433 SMIM2Q9BVW6 85 aa14□□□□□ -0.17
ACTN1-220ENST00000556433 A0A0J9YXV3 536 aa13.99□□□□□ -0.17
ACTN1-220ENST00000556433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms