RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 LGALS9CQ6DKI2 356 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 LYPD5Q6UWN5 251 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 Q8N976 141 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 C15orf53Q8NAA6 179 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 PMCHL2Q9BQD1 86 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 VCX2Q9H322 139 aa6.68□□□□□ -1.34
HNRNPC-220ENST00000555585 A0A087WX48 190 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 PMVKQ15126 192 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 LELP1Q5T871 98 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 LINC01545Q5VT33 79 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 Q6ZUT4 128 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 MRPL52Q86TS9 123 aaKnown RBP6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 OR5A1Q8NGJ0 315 aa6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
HNRNPC-220ENST00000555585 TRAV8-6A0A0B4J262 113 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 NPSP0C0P6 89 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 ZNF25P17030 456 aaPredicted RBP6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 ODF1Q14990 250 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 TEX43Q6ZNM6 134 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 LINC00518Q8N0U6 118 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 C12orf57Q99622 126 aa6.66□□□□□ -1.34
HNRNPC-220ENST00000555585 TIRAPP58753 221 aa6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 MRPS36P82909 103 aaKnown RBP6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 ESRGQ1W209 222 aa6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 CDPF1Q6NVV7 123 aa6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 ZNF664Q8N3J9 261 aa6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 CST9LQ9H4G1 147 aa6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 MRPL35Q9NZE8 188 aaKnown RBP6.65□□□□□ -1.34
HNRNPC-220ENST00000555585 MEGF8Q7Z7M0 2845 aa6.65□□□□□ -1.35
HNRNPC-220ENST00000555585 F8VRH5 84 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 DPM2O94777 84 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 IGKCP01834 107 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 PKIAP61925 76 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 S100A12P80511 92 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 FAM104AQ969W3 186 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 AMELXQ99217 191 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 C2orf88Q9BSF0 95 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 COL7A1Q02388 2944 aa6.64□□□□□ -1.35
HNRNPC-220ENST00000555585 IGLV4-60A0A075B6I1 120 aa6.63□□□□□ -1.35
HNRNPC-220ENST00000555585 RBX1P62877 108 aa6.63□□□□□ -1.35
HNRNPC-220ENST00000555585 MPV17L2Q567V2 206 aa6.63□□□□□ -1.35
HNRNPC-220ENST00000555585 VAMP8Q9BV40 100 aa6.63□□□□□ -1.35
HNRNPC-220ENST00000555585 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
HNRNPC-220ENST00000555585 IGKV3OR2-268A0A0C4DH90 116 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 A0A0J9YXV3 536 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 A0A1B0GUV1 79 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 HSBP1L1C9JCN9 74 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 PLNP26678 52 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 CCL18P55774 89 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 WFDC10BQ8IUB3 73 aa6.62□□□□□ -1.35
HNRNPC-220ENST00000555585 IGLV4-69A0A075B6H9 119 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 TRAV9-2A0A087WT02 112 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 TRAV13-1A0A0B4J241 112 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 IGHV3-30P01768 117 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 IGHV3-33P01772 117 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 IGHV3-30-3P0DP02 117 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 IGHV3-30-5P0DP03 117 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 MAJINQ3KP22 176 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 PAM16Q9Y3D7 125 aa6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-220ENST00000555585 C11orf86A6NJI1 115 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 IGLC3P0DOY3 106 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 UBE2D1P51668 147 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 SPATA45Q537H7 98 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 ZFAND6Q6FIF0 208 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 CHAC1Q9BUX1 264 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 APLNQ9ULZ1 77 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 LINC00588Q9Y4M8 146 aa6.6□□□□□ -1.35
HNRNPC-220ENST00000555585 TINCRA0A1B0GVN0 87 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 TCTAP57738 103 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 UBE2DNLQ8IWF7 75 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 LINC00269Q8N2A0 174 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 STPG4Q8N801 248 aa6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 GEMIN7Q9H840 131 aaKnown RBP6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 MRPS16Q9Y3D3 137 aaKnown RBP6.59□□□□□ -1.35
HNRNPC-220ENST00000555585 SEC11AP67812 179 aa6.58□□□□□ -1.36
HNRNPC-220ENST00000555585 SS18Q15532 418 aa6.58□□□□□ -1.36
HNRNPC-220ENST00000555585 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
HNRNPC-220ENST00000555585 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
HNRNPC-220ENST00000555585 LINC00959A0A1B0GUT2 108 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 SIVA1O15304 175 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 CRPP02741 224 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 HERVK_113P61574 105 aa6.57□□□□□ -1.36
HNRNPC-220ENST00000555585 HERVK_113P63121 156 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms