RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
SHMT2-213ENST00000554600 ESDP10768 282 aa6.94□□□□□ -1.3
SHMT2-213ENST00000554600 CLRN3Q8NCR9 226 aa6.94□□□□□ -1.3
SHMT2-213ENST00000554600 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
SHMT2-213ENST00000554600 D6R8Y8 96 aa6.93□□□□□ -1.3
SHMT2-213ENST00000554600 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
SHMT2-213ENST00000554600 SEC11CQ9BY50 192 aa6.93□□□□□ -1.3
SHMT2-213ENST00000554600 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
SHMT2-213ENST00000554600 A0A1B0GXF2 115 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 TNFRSF6BO95407 300 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 ADCYAP1P18509 176 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 XCL1P47992 114 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 SMAGPQ0VAQ4 97 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 Q6ZSA8 131 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 SCXQ7RTU7 201 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
SHMT2-213ENST00000554600 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
SHMT2-213ENST00000554600 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
SHMT2-213ENST00000554600 NPYP01303 97 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 SS18Q15532 418 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 MRPL52Q86TS9 123 aaKnown RBP6.91□□□□□ -1.3
SHMT2-213ENST00000554600 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 CHAC1Q9BUX1 264 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 SMIM2Q9BVW6 85 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 CTDSP1Q9GZU7 261 aa6.91□□□□□ -1.3
SHMT2-213ENST00000554600 LINC00959A0A1B0GUT2 108 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 CCL25O15444 150 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 PPBPP02775 128 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.3
SHMT2-213ENST00000554600 TMEM136Q6ZRR5 245 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 ORMDL3Q8N138 153 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 PRELID3AQ96N28 172 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 IMMP2LQ96T52 175 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 CDC42SE2Q9NRR3 84 aa6.9□□□□□ -1.3
SHMT2-213ENST00000554600 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
SHMT2-213ENST00000554600 TCAPO15273 167 aa6.89□□□□□ -1.31
SHMT2-213ENST00000554600 C10orf91Q5T1B1 145 aa6.89□□□□□ -1.31
SHMT2-213ENST00000554600 C15orf56Q8N910 161 aa6.89□□□□□ -1.31
SHMT2-213ENST00000554600 CIRBP-AS1Q8TBR5 109 aa6.89□□□□□ -1.31
SHMT2-213ENST00000554600 DPH3Q96FX2 82 aa6.89□□□□□ -1.31
SHMT2-213ENST00000554600 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
SHMT2-213ENST00000554600 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
SHMT2-213ENST00000554600 RAB5AP20339 215 aa6.88□□□□□ -1.31
SHMT2-213ENST00000554600 CNBPP62633 177 aaKnown RBP6.88□□□□□ -1.31
SHMT2-213ENST00000554600 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
SHMT2-213ENST00000554600 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
SHMT2-213ENST00000554600 FOXI1Q12951 378 aa6.88□□□□□ -1.31
SHMT2-213ENST00000554600 CARHSP1Q9Y2V2 147 aaKnown RBP6.88□□□□□ -1.31
SHMT2-213ENST00000554600 UBE2D4Q9Y2X8 147 aa6.88□□□□□ -1.31
SHMT2-213ENST00000554600 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
SHMT2-213ENST00000554600 TRAV13-1A0A0B4J241 112 aa6.87□□□□□ -1.31
SHMT2-213ENST00000554600 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
SHMT2-213ENST00000554600 PHOX2AO14813 284 aa6.87□□□□□ -1.31
SHMT2-213ENST00000554600 MALP21145 153 aa6.87□□□□□ -1.31
SHMT2-213ENST00000554600 S100PP25815 95 aa6.87□□□□□ -1.31
SHMT2-213ENST00000554600 Q6ZUT4 128 aa6.87□□□□□ -1.31
SHMT2-213ENST00000554600 TRAV9-1A0A075B6T8 112 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 GVQW2A0A096LPI5 108 aaPredicted RBP6.86□□□□□ -1.31
SHMT2-213ENST00000554600 IGHV1-58A0A0C4DH39 117 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 SLPIP03973 132 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 RHEBQ15382 184 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 CD164L2Q6UWJ8 174 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 TIMM21Q9BVV7 248 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 MAP1LC3AQ9H492 121 aa6.86□□□□□ -1.31
SHMT2-213ENST00000554600 CSDC2Q9Y534 153 aaKnown RBP6.86□□□□□ -1.31
SHMT2-213ENST00000554600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
SHMT2-213ENST00000554600 FAT1Q14517 4588 aa6.85□□□□□ -1.31
SHMT2-213ENST00000554600 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
SHMT2-213ENST00000554600 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
SHMT2-213ENST00000554600 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
SHMT2-213ENST00000554600 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
SHMT2-213ENST00000554600 COX7A2LO14548 114 aa6.84□□□□□ -1.31
SHMT2-213ENST00000554600 CHTF8P0CG12 524 aa6.84□□□□□ -1.31
SHMT2-213ENST00000554600 SVBPQ8N300 66 aa6.84□□□□□ -1.31
SHMT2-213ENST00000554600 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
SHMT2-213ENST00000554600 SPANXA1Q9NS26 97 aa6.84□□□□□ -1.31
SHMT2-213ENST00000554600 LAMTOR2Q9Y2Q5 125 aa6.84□□□□□ -1.31
SHMT2-213ENST00000554600 IGKV2-24A0A0C4DH68 120 aa6.83□□□□□ -1.32
SHMT2-213ENST00000554600 IFITM10A6NMD0 228 aa6.83□□□□□ -1.32
SHMT2-213ENST00000554600 PANO1I0J062 215 aa6.83□□□□□ -1.32
SHMT2-213ENST00000554600 APOC3P02656 99 aa6.83□□□□□ -1.32
SHMT2-213ENST00000554600 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
SHMT2-213ENST00000554600 COX6A2Q02221 97 aa6.83□□□□□ -1.32
SHMT2-213ENST00000554600 C5orf38Q86SI9 138 aa6.83□□□□□ -1.32
SHMT2-213ENST00000554600 PRSS47A8MTI9 375 aa6.82□□□□□ -1.32
SHMT2-213ENST00000554600 SNAPINO95295 136 aa6.82□□□□□ -1.32
SHMT2-213ENST00000554600 Q8N8P6 123 aa6.82□□□□□ -1.32
SHMT2-213ENST00000554600 PRSS3P2Q8NHM4 247 aa6.82□□□□□ -1.32
SHMT2-213ENST00000554600 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
SHMT2-213ENST00000554600 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms