RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 MRPL52Q86TS9 123 aaKnown RBP15.27■□□□□ 0.04
NEK9-203ENST00000553945 CLRN3Q8NCR9 226 aa15.27■□□□□ 0.04
NEK9-203ENST00000553945 TRAV9-1A0A075B6T8 112 aa15.26■□□□□ 0.03
NEK9-203ENST00000553945 TCAPO15273 167 aa15.26■□□□□ 0.03
NEK9-203ENST00000553945 RHEBQ15382 184 aa15.26■□□□□ 0.03
NEK9-203ENST00000553945 RPS10P5Q9NQ39 176 aa15.26■□□□□ 0.03
NEK9-203ENST00000553945 DGAT2L7PQ6IED9 249 aa15.25■□□□□ 0.03
NEK9-203ENST00000553945 SMAGPQ0VAQ4 97 aa15.24■□□□□ 0.03
NEK9-203ENST00000553945 GAGE12HA6NDE8 117 aa15.23■□□□□ 0.03
NEK9-203ENST00000553945 TMEM18Q96B42 140 aa15.23■□□□□ 0.03
NEK9-203ENST00000553945 CDC42SE2Q9NRR3 84 aa15.23■□□□□ 0.03
NEK9-203ENST00000553945 LAMTOR2Q9Y2Q5 125 aa15.23■□□□□ 0.03
NEK9-203ENST00000553945 LOC389332A0A1B0GUA5 103 aa15.22■□□□□ 0.03
NEK9-203ENST00000553945 APOC3P02656 99 aa15.22■□□□□ 0.03
NEK9-203ENST00000553945 ZNF664Q8N3J9 261 aa15.22■□□□□ 0.03
NEK9-203ENST00000553945 MAP1LC3AQ9H492 121 aa15.22■□□□□ 0.03
NEK9-203ENST00000553945 UBE2D4Q9Y2X8 147 aa15.22■□□□□ 0.03
NEK9-203ENST00000553945 CHCHD10Q8WYQ3 142 aaPredicted RBP15.21■□□□□ 0.03
NEK9-203ENST00000553945 RAB5AP20339 215 aa15.2■□□□□ 0.02
NEK9-203ENST00000553945 NDUFA5Q16718 116 aa15.2■□□□□ 0.02
NEK9-203ENST00000553945 DNAH8Q96JB1 4490 aa15.19■□□□□ 0.02
NEK9-203ENST00000553945 LINC00959A0A1B0GUT2 108 aa15.19■□□□□ 0.02
NEK9-203ENST00000553945 PRSS1P07477 247 aa15.19■□□□□ 0.02
NEK9-203ENST00000553945 RPL39P62891 51 aaKnown RBP15.19■□□□□ 0.02
NEK9-203ENST00000553945 LINC01620Q4KN68 170 aa15.19■□□□□ 0.02
NEK9-203ENST00000553945 CSDC2Q9Y534 153 aaKnown RBP15.19■□□□□ 0.02
NEK9-203ENST00000553945 PRSS47A8MTI9 375 aa15.18■□□□□ 0.02
NEK9-203ENST00000553945 TIMM21Q9BVV7 248 aa15.18■□□□□ 0.02
NEK9-203ENST00000553945 XCL1P47992 114 aa15.17■□□□□ 0.02
NEK9-203ENST00000553945 KIAA1644Q3SXP7 199 aa15.17■□□□□ 0.02
NEK9-203ENST00000553945 RNASE13Q5GAN3 156 aaKnown RBP15.17■□□□□ 0.02
NEK9-203ENST00000553945 CCL25O15444 150 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 XGP55808 180 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 SS18Q15532 418 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 Q6ZUT4 128 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 SVBPQ8N300 66 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 Q8N8P6 123 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 GNB1LQ9BYB4 327 aa15.16■□□□□ 0.02
NEK9-203ENST00000553945 hDV102S1A0JD36 115 aa15.15■□□□□ 0.02
NEK9-203ENST00000553945 SNAPINO95295 136 aa15.15■□□□□ 0.02
NEK9-203ENST00000553945 FOXI1Q12951 378 aa15.14■□□□□ 0.01
NEK9-203ENST00000553945 HAMPP81172 84 aa15.13■□□□□ 0.01
NEK9-203ENST00000553945 COX19Q49B96 90 aa15.13■□□□□ 0.01
NEK9-203ENST00000553945 CFAP161Q6P656 301 aa15.13■□□□□ 0.01
NEK9-203ENST00000553945 SPANXA1Q9NS26 97 aa15.13■□□□□ 0.01
NEK9-203ENST00000553945 FAM30AQ9NZY2 134 aa15.13■□□□□ 0.01
NEK9-203ENST00000553945 C15orf56Q8N910 161 aa15.12■□□□□ 0.01
NEK9-203ENST00000553945 KRTAP17-1Q9BYP8 105 aa15.12■□□□□ 0.01
NEK9-203ENST00000553945 AP5S1Q9NUS5 200 aa15.11■□□□□ 0.01
NEK9-203ENST00000553945 TRAV13-1A0A0B4J241 112 aa15.1■□□□□ 0.01
NEK9-203ENST00000553945 C1orf196B1AJZ1 125 aa15.1■□□□□ 0.01
NEK9-203ENST00000553945 MT-ND6P03923 174 aa15.1■□□□□ 0.01
NEK9-203ENST00000553945 OPRPNQ99935 248 aaPredicted RBP15.1■□□□□ 0.01
NEK9-203ENST00000553945 MRPL18Q9H0U6 180 aaKnown RBP15.1■□□□□ 0.01
NEK9-203ENST00000553945 NXT2Q9NPJ8 142 aaKnown RBP15.1■□□□□ 0.01
NEK9-203ENST00000553945 TGIF2-C20orf24A0A0A6YYL0 155 aa15.09■□□□□ 0.01
NEK9-203ENST00000553945 IFI27P40305 119 aaPredicted RBP15.09■□□□□ 0.01
NEK9-203ENST00000553945 CD164L2Q6UWJ8 174 aa15.09■□□□□ 0.01
NEK9-203ENST00000553945 MRPS36P82909 103 aaKnown RBP15.08■□□□□ 0
NEK9-203ENST00000553945 FABP9Q0Z7S8 132 aa15.08■□□□□ 0
NEK9-203ENST00000553945 HIGD2BQ4VC39 106 aa15.08■□□□□ 0
NEK9-203ENST00000553945 ORMDL2Q53FV1 153 aa15.08■□□□□ 0
NEK9-203ENST00000553945 Q8N1X5 172 aa15.08■□□□□ 0
NEK9-203ENST00000553945 FAM104AQ969W3 186 aa15.08■□□□□ 0
NEK9-203ENST00000553945 Q6ZSA8 131 aa15.07■□□□□ 0
NEK9-203ENST00000553945 SLC7A5P1Q8MH63 180 aa15.07■□□□□ 0
NEK9-203ENST00000553945 ALKBH7Q9BT30 221 aaPredicted RBP15.07■□□□□ 0
NEK9-203ENST00000553945 K7EMI3 77 aa15.06■□□□□ 0
NEK9-203ENST00000553945 CNBPP62633 177 aaKnown RBP15.06■□□□□ 0
NEK9-203ENST00000553945 C9orf163Q8N9P6 203 aa15.06■□□□□ 0
NEK9-203ENST00000553945 CYSLTR1Q9Y271 337 aa15.06■□□□□ 0
NEK9-203ENST00000553945 PYGO1Q9Y3Y4 419 aa15.06■□□□□ 0
NEK9-203ENST00000553945 C2orf66Q6UXQ4 117 aa15.05■□□□□ -0
NEK9-203ENST00000553945 PRSS3P2Q8NHM4 247 aa15.05■□□□□ -0
NEK9-203ENST00000553945 KRTAP4-5Q9BYR2 181 aa15.05■□□□□ -0
NEK9-203ENST00000553945 IGHV1-58A0A0C4DH39 117 aa15.04■□□□□ -0
NEK9-203ENST00000553945 IFITM10A6NMD0 228 aa15.04■□□□□ -0
NEK9-203ENST00000553945 SLPIP03973 132 aa15.04■□□□□ -0
NEK9-203ENST00000553945 IGLV4-3A0A075B6K6 122 aa15.03■□□□□ -0
NEK9-203ENST00000553945 GVQW2A0A096LPI5 108 aaPredicted RBP15.03■□□□□ -0
NEK9-203ENST00000553945 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.03■□□□□ -0
NEK9-203ENST00000553945 COX7A2LO14548 114 aa15.03■□□□□ -0
NEK9-203ENST00000553945 SMR3BP02814 79 aaPredicted RBP15.03■□□□□ -0
NEK9-203ENST00000553945 TRAPPC1Q9Y5R8 145 aa15.02■□□□□ -0
NEK9-203ENST00000553945 ABCA13Q86UQ4 5058 aa15.02□□□□□ -0.01
NEK9-203ENST00000553945 FAT1Q14517 4588 aa15.02□□□□□ -0.01
NEK9-203ENST00000553945 MALP21145 153 aa15.01□□□□□ -0.01
NEK9-203ENST00000553945 TMEM141Q96I45 108 aa15.01□□□□□ -0.01
NEK9-203ENST00000553945 G0S2P27469 103 aa15□□□□□ -0.01
NEK9-203ENST00000553945 C5orf38Q86SI9 138 aa15□□□□□ -0.01
NEK9-203ENST00000553945 PCLOQ9Y6V0 5065 aa15□□□□□ -0.01
NEK9-203ENST00000553945 IGHV3-64A0A075B6Q5 118 aa14.99□□□□□ -0.01
NEK9-203ENST00000553945 LINC00526Q96FQ7 95 aa14.99□□□□□ -0.01
NEK9-203ENST00000553945 Q6ZN92 141 aa14.98□□□□□ -0.01
NEK9-203ENST00000553945 TEX43Q6ZNM6 134 aa14.98□□□□□ -0.01
NEK9-203ENST00000553945 SCXQ7RTU7 201 aa14.98□□□□□ -0.01
NEK9-203ENST00000553945 CHAC1Q9BUX1 264 aa14.98□□□□□ -0.01
NEK9-203ENST00000553945 EPM2AB3EWF7 344 aa14.97□□□□□ -0.01
NEK9-203ENST00000553945 SDIM1Q6ZPB5 146 aa14.97□□□□□ -0.01
NEK9-203ENST00000553945 IGIPA6NJ69 53 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms