RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CAMPP49913 170 aa8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 SUMO2P61956 95 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
HNRNPC-205ENST00000553300 F8W036 122 aa8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 TCAPO15273 167 aa8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 NRACQ8N912 160 aa8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
HNRNPC-205ENST00000553300 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 HBBP68871 147 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 PNRC1Q12796 327 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 CDC42SE2Q9NRR3 84 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 CCL25O15444 150 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 CKS2P33552 79 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 RPL32P62910 135 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 SS18Q15532 418 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 ATP5L2Q7Z4Y8 100 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 ZNF664Q8N3J9 261 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 TMEM18Q96B42 140 aa8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-205ENST00000553300 IGHV3-64A0A075B6Q5 118 aa8.47□□□□□ -1.05
HNRNPC-205ENST00000553300 LINC00959A0A1B0GUT2 108 aa8.47□□□□□ -1.05
HNRNPC-205ENST00000553300 PPBPP02775 128 aa8.47□□□□□ -1.05
HNRNPC-205ENST00000553300 C15orf56Q8N910 161 aa8.47□□□□□ -1.05
HNRNPC-205ENST00000553300 A0A1B0GXF2 115 aa8.46□□□□□ -1.06
HNRNPC-205ENST00000553300 PHOX2AO14813 284 aa8.46□□□□□ -1.06
HNRNPC-205ENST00000553300 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-205ENST00000553300 MRPL54Q6P161 138 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-205ENST00000553300 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
HNRNPC-205ENST00000553300 SLPIP03973 132 aa8.45□□□□□ -1.06
HNRNPC-205ENST00000553300 XCL1P47992 114 aa8.45□□□□□ -1.06
HNRNPC-205ENST00000553300 FOXI1Q12951 378 aa8.45□□□□□ -1.06
HNRNPC-205ENST00000553300 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
HNRNPC-205ENST00000553300 ANAPC16Q96DE5 110 aa8.45□□□□□ -1.06
HNRNPC-205ENST00000553300 GVQW2A0A096LPI5 108 aaPredicted RBP8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 C1orf196B1AJZ1 125 aa8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 MT-ND4LP03901 98 aa8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 CIRBPQ14011 172 aaKnown RBP8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 CLLU1Q5K131 121 aa8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 TIMM21Q9BVV7 248 aa8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
HNRNPC-205ENST00000553300 IGHV1-58A0A0C4DH39 117 aa8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 D6R8Y8 96 aa8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 SMIM2Q9BVW6 85 aa8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 PKIGQ9Y2B9 76 aa8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 HERC1Q15751 4861 aa8.43□□□□□ -1.06
HNRNPC-205ENST00000553300 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
HNRNPC-205ENST00000553300 ORMDL3Q8N138 153 aa8.42□□□□□ -1.06
HNRNPC-205ENST00000553300 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
HNRNPC-205ENST00000553300 LAMTOR2Q9Y2Q5 125 aa8.41□□□□□ -1.06
HNRNPC-205ENST00000553300 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
HNRNPC-205ENST00000553300 PANO1I0J062 215 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 NPYP01303 97 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 RAB5AP20339 215 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 COX6A2Q02221 97 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 PRELID3AQ96N28 172 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
HNRNPC-205ENST00000553300 TRAV13-1A0A0B4J241 112 aa8.38□□□□□ -1.07
HNRNPC-205ENST00000553300 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
HNRNPC-205ENST00000553300 COX7A2LO14548 114 aa8.38□□□□□ -1.07
HNRNPC-205ENST00000553300 MALP21145 153 aa8.38□□□□□ -1.07
HNRNPC-205ENST00000553300 SPACA4Q8TDM5 124 aa8.38□□□□□ -1.07
HNRNPC-205ENST00000553300 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
HNRNPC-205ENST00000553300 A0A087WYN8 130 aa8.37□□□□□ -1.07
HNRNPC-205ENST00000553300 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-205ENST00000553300 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-205ENST00000553300 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
HNRNPC-205ENST00000553300 APOMO95445 188 aa8.36□□□□□ -1.07
HNRNPC-205ENST00000553300 RPL39P62891 51 aaKnown RBP8.36□□□□□ -1.07
HNRNPC-205ENST00000553300 Q6ZUT4 128 aa8.36□□□□□ -1.07
HNRNPC-205ENST00000553300 PRSS3P2Q8NHM4 247 aa8.36□□□□□ -1.07
HNRNPC-205ENST00000553300 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
HNRNPC-205ENST00000553300 CHTF8P0CG12 524 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 CARD19Q96LW7 228 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 PYGO1Q9Y3Y4 419 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 TMEM218A2RU14 115 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 K7EMI3 77 aa8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-205ENST00000553300 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
HNRNPC-205ENST00000553300 IGKV2-24A0A0C4DH68 120 aa8.34□□□□□ -1.07
HNRNPC-205ENST00000553300 OXTP01178 125 aa8.34□□□□□ -1.07
HNRNPC-205ENST00000553300 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
HNRNPC-205ENST00000553300 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms