RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 RNASE7Q9H1E1 156 aaKnown RBP3.1□□□□□ -1.91
SCAF11-214ENST00000550893 LRP2P98164 4655 aa3.1□□□□□ -1.91
SCAF11-214ENST00000550893 IGLV4-60A0A075B6I1 120 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 TRBV7-3A0A075B6L6 115 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 TRBV6-8A0A0A6YYG3 113 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 EVI2AP22794 236 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 PPT1P50897 306 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 RAB4BP61018 213 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 OR10J3Q5JRS4 329 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 Q8N976 141 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 OCC1Q8TAD7 63 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 DEFB104AQ8WTQ1 72 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 PCNPQ8WW12 178 aaKnown RBP3.09□□□□□ -1.91
SCAF11-214ENST00000550893 PRADC1Q9BSG0 188 aa3.09□□□□□ -1.91
SCAF11-214ENST00000550893 TRAV26-2A0A0B4J265 109 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 TEX46H3BTG2 121 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 PFDN1O60925 122 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 SMR3BP02814 79 aaPredicted RBP3.08□□□□□ -1.92
SCAF11-214ENST00000550893 S100A9P06702 114 aaKnown RBP3.08□□□□□ -1.92
SCAF11-214ENST00000550893 SRP19P09132 144 aaKnown RBP3.08□□□□□ -1.92
SCAF11-214ENST00000550893 S100A4P26447 101 aaKnown RBP3.08□□□□□ -1.92
SCAF11-214ENST00000550893 RPS10P46783 165 aaKnown RBP3.08□□□□□ -1.92
SCAF11-214ENST00000550893 RAB5CP51148 216 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 IQCJQ1A5X6 159 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 REG3GQ6UW15 175 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 LYZL1Q6UWQ5 148 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 SCXQ7RTU7 201 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 AKAP14Q86UN6 197 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 C10orf126Q8N4M7 172 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 FER1L6-AS1Q8NA97 138 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 GATD1Q8NB37 220 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 BAALCQ8WXS3 180 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 RPL39LQ96EH5 51 aaKnown RBP3.08□□□□□ -1.92
SCAF11-214ENST00000550893 SMIM12Q96EX1 92 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 TMEM70Q9BUB7 260 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 KLK12Q9UKR0 248 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 PHLDA3Q9Y5J5 127 aa3.08□□□□□ -1.92
SCAF11-214ENST00000550893 RBX1P62877 108 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
SCAF11-214ENST00000550893 CLPSL2Q6UWE3 100 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 FAM231DQ6ZW35 169 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 LINC01551Q86U37 167 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 OR2D3Q8NGH3 330 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 FAM210AQ96ND0 272 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 AP1S3Q96PC3 154 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 V9GYV3 84 aa3.07□□□□□ -1.92
SCAF11-214ENST00000550893 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.06□□□□□ -1.92
SCAF11-214ENST00000550893 TRAV8-6A0A0B4J262 113 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 TMEM250H0YL14 139 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 PDE6DO43924 150 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 NDUFS6O75380 124 aaKnown RBP3.06□□□□□ -1.92
SCAF11-214ENST00000550893 NTF3P20783 257 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 GNG4P50150 75 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 SSTP61278 116 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 ZNF56Q15929 161 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 PGLYRP4Q96LB8 373 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 RPP21Q9H633 154 aaKnown RBP3.06□□□□□ -1.92
SCAF11-214ENST00000550893 MED9Q9NWA0 146 aa3.06□□□□□ -1.92
SCAF11-214ENST00000550893 LPAP08519 4548 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 A0A087WWC5 75 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 MT1HL1P0DM35 61 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 ESDP10768 282 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 EIF5AP63241 154 aaKnown RBP3.05□□□□□ -1.92
SCAF11-214ENST00000550893 C15orf54Q8N8G6 183 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 CIRBP-AS1Q8TBR5 109 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 ISOC2Q96AB3 205 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 UBE2WQ96B02 151 aa3.05□□□□□ -1.92
SCAF11-214ENST00000550893 IGKV2D-24A0A075B6R9 120 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 TRAV9-2A0A087WT02 112 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 TRAV8-3A0A0A6YYJ7 113 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 A0A1B0GXF2 115 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 SMKR1H3BMG3 65 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 P01737 135 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 MGPP08493 103 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 POLR2KP53803 58 aaKnown RBP3.04□□□□□ -1.92
SCAF11-214ENST00000550893 RPL23P62829 140 aaKnown RBP3.04□□□□□ -1.92
SCAF11-214ENST00000550893 CACNG7P62955 275 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 IFITM2Q01629 132 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 SPANXN1Q5VSR9 72 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 RASL11AQ6T310 242 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 LINC00269Q8N2A0 174 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 DPH3P1Q9H4G8 78 aa3.04□□□□□ -1.92
SCAF11-214ENST00000550893 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 IGLV10-54A0A075B6I4 117 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.03□□□□□ -1.92
SCAF11-214ENST00000550893 IGKV2-29A2NJV5 120 aaPredicted RBP3.03□□□□□ -1.92
SCAF11-214ENST00000550893 RPL37AP8A6NKH3 93 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 NCR2O95944 276 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 CHTF8P0CG12 524 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 ADCYAP1P18509 176 aa3.03□□□□□ -1.92
SCAF11-214ENST00000550893 RPS20P60866 119 aaKnown RBP3.03□□□□□ -1.92
SCAF11-214ENST00000550893 CNBPP62633 177 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms