RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CDK5R1Q15078 307 aa3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 ETDBQ3ZM63 59 aa3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 IBA57Q5T440 356 aaKnown RBP3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 Q6P435 159 aa3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 TMEM136Q6ZRR5 245 aa3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 SRSF12Q8WXF0 261 aaKnown RBP3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 ADAT3Q96EY9 351 aaPredicted RBP3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 CYYR1Q96J86 154 aa3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 PRELID3AQ96N28 172 aa3.88□□□□□ -1.79
TGFBR1-208ENST00000550253 IGHV1-3A0A0C4DH29 117 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 IGKV1-6A0A0C4DH72 117 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 OOSP1A8MZH6 123 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 G3V318 75 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 H3BP45 60 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 M0R2P5 195 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 DPM2O94777 84 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 NDUFC2O95298 119 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 IGKV1-39P01597 117 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 IGKV1D-39P04432 117 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 CMC4P56277 68 aaPredicted RBP3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 HERVK_113P63121 156 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 INSL4Q14641 139 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 Q5W150 140 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 LINC00526Q96FQ7 95 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 SMIM7Q9BQ49 75 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 CHCHD7Q9BUK0 85 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 GNB1LQ9BYB4 327 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 SORL1Q92673 2214 aa3.87□□□□□ -1.79
TGFBR1-208ENST00000550253 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 ZNF816Q0VGE8 651 aaPredicted RBP3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 WFDC2Q14508 124 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 C2orf83Q53S99 150 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 NMSQ5H8A3 153 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 C9orf153Q5TBE3 101 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 Q5XG85 94 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 HRCT1Q6UXD1 115 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 C1orf158Q8N1D5 194 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 C10orf126Q8N4M7 172 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 OR10AC1Q8NH08 325 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 UBALD1Q8TB05 177 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 BORCS8Q96FH0 119 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 FAM103A1Q9BTL3 118 aaKnown RBP3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 TMEM222Q9H0R3 208 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 LINC00574Q9H8X3 128 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 PRO0461Q9UI25 63 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
TGFBR1-208ENST00000550253 IGLV4-69A0A075B6H9 119 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 TRAV8-2A0A0B4J237 113 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 LOC107986453A0A1B0GWG9 222 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 OVOL1O14753 267 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 LGALS1P09382 135 aaKnown RBP3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 INSL3P51460 131 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 CCL20P78556 96 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 ZNF90Q03938 601 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 SLC38A11Q08AI6 406 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 RRN3P1Q2M238 152 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 C2orf91Q6ZV80 131 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 Q8IYB0 196 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 ORMDL3Q8N138 153 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 NABP2Q9BQ15 211 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 IMUPQ9GZP8 106 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 RNASE7Q9H1E1 156 aaKnown RBP3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 FBXL15Q9H469 300 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 C21orf62Q9NYP8 219 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 FAT2Q9NYQ8 4349 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 TRBV20-1A0A075B6N2 111 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 IGHV3-43A0A0B4J1X8 118 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 GRIFINA4D1Z8 144 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 CRYGAP11844 174 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 TAS2R45P59539 299 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 LYRM7Q5U5X0 104 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 Q6ZS49 121 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 LINC00596Q86U02 117 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 FXYD5Q96DB9 178 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 ABHD14BQ96IU4 210 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 SLC39A9Q9NUM3 307 aa3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 AMMECR1Q9Y4X0 333 aaPredicted RBP3.85□□□□□ -1.79
TGFBR1-208ENST00000550253 C3orf85A0A1B0GTC6 90 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 SDCBPO00560 298 aaPredicted RBP3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 COX7A2P2O60397 106 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 PIGYQ3MUY2 71 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 LUZP6Q538Z0 58 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 Q56UQ5 140 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 TEN1Q86WV5 123 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 PDPNQ86YL7 162 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 TSKUQ8WUA8 353 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 VSIRQ9H7M9 311 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 PKIGQ9Y2B9 76 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 ARL2-SNX15V9GYD0 113 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 PKD1P98161 4303 aa3.84□□□□□ -1.8
TGFBR1-208ENST00000550253 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
TGFBR1-208ENST00000550253 IZUMO1RA6ND01 250 aa3.83□□□□□ -1.8
TGFBR1-208ENST00000550253 C2orf70A6NJV1 201 aa3.83□□□□□ -1.8
TGFBR1-208ENST00000550253 IGLV1-51P01701 117 aa3.83□□□□□ -1.8
TGFBR1-208ENST00000550253 CBLN1P23435 193 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms