RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 BORCS7Q96B45 105 aa8.49□□□□□ -1.05
GCN1-206ENST00000549815 LINC00959A0A1B0GUT2 108 aa8.48□□□□□ -1.05
GCN1-206ENST00000549815 MRPL52Q86TS9 123 aaKnown RBP8.48□□□□□ -1.05
GCN1-206ENST00000549815 NUP35Q8NFH5 326 aa8.48□□□□□ -1.05
GCN1-206ENST00000549815 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
GCN1-206ENST00000549815 CDC42SE2Q9NRR3 84 aa8.48□□□□□ -1.05
GCN1-206ENST00000549815 CCL25O15444 150 aa8.47□□□□□ -1.05
GCN1-206ENST00000549815 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
GCN1-206ENST00000549815 Q6ZRU5 148 aa8.47□□□□□ -1.05
GCN1-206ENST00000549815 ISOC2Q96AB3 205 aa8.47□□□□□ -1.05
GCN1-206ENST00000549815 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
GCN1-206ENST00000549815 BTF3L4Q96K17 158 aa8.47□□□□□ -1.05
GCN1-206ENST00000549815 SMKR1H3BMG3 65 aa8.46□□□□□ -1.06
GCN1-206ENST00000549815 XCL1P47992 114 aa8.46□□□□□ -1.06
GCN1-206ENST00000549815 RPL23P62829 140 aaKnown RBP8.46□□□□□ -1.06
GCN1-206ENST00000549815 NRACQ8N912 160 aa8.46□□□□□ -1.06
GCN1-206ENST00000549815 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
GCN1-206ENST00000549815 A0A1B0GVG6 124 aa8.45□□□□□ -1.06
GCN1-206ENST00000549815 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
GCN1-206ENST00000549815 C9JQL5 133 aa8.45□□□□□ -1.06
GCN1-206ENST00000549815 PHOX2AO14813 284 aa8.45□□□□□ -1.06
GCN1-206ENST00000549815 RIGQ13278 110 aa8.45□□□□□ -1.06
GCN1-206ENST00000549815 A0A096LNI7 61 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 TMEM241Q24JQ0 296 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 MAJINQ3KP22 176 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 FAM74A3Q4VXF1 159 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 CD164L2Q6UWJ8 174 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 ZNF664Q8N3J9 261 aa8.44□□□□□ -1.06
GCN1-206ENST00000549815 VCYO14598 125 aa8.43□□□□□ -1.06
GCN1-206ENST00000549815 SUMO2P61956 95 aaKnown RBP8.43□□□□□ -1.06
GCN1-206ENST00000549815 SS18Q15532 418 aa8.43□□□□□ -1.06
GCN1-206ENST00000549815 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
GCN1-206ENST00000549815 NAT8BQ9UHF3 227 aa8.43□□□□□ -1.06
GCN1-206ENST00000549815 UBE2D4Q9Y2X8 147 aa8.43□□□□□ -1.06
GCN1-206ENST00000549815 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
GCN1-206ENST00000549815 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
GCN1-206ENST00000549815 SRSF3P84103 164 aaKnown RBP8.42□□□□□ -1.06
GCN1-206ENST00000549815 MRPL51Q4U2R6 128 aaKnown RBP8.42□□□□□ -1.06
GCN1-206ENST00000549815 FAM104BQ5XKR9 115 aa8.42□□□□□ -1.06
GCN1-206ENST00000549815 STPG4Q8N801 248 aa8.42□□□□□ -1.06
GCN1-206ENST00000549815 PPP1R17O96001 155 aa8.41□□□□□ -1.06
GCN1-206ENST00000549815 ADIRFQ15847 76 aa8.41□□□□□ -1.06
GCN1-206ENST00000549815 C7orf33Q8WU49 177 aa8.41□□□□□ -1.06
GCN1-206ENST00000549815 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
GCN1-206ENST00000549815 NAT8Q9UHE5 227 aa8.41□□□□□ -1.06
GCN1-206ENST00000549815 FCER1GP30273 86 aa8.4□□□□□ -1.06
GCN1-206ENST00000549815 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
GCN1-206ENST00000549815 TRBV24-1A0A075B6N3 115 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 LINC00862A6NCI5 91 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 C1orf196B1AJZ1 125 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 PPP1R2P9O14990 202 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 CAMPP49913 170 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 RPL32P62910 135 aaKnown RBP8.39□□□□□ -1.07
GCN1-206ENST00000549815 PRR3P79522 188 aaKnown RBP8.39□□□□□ -1.07
GCN1-206ENST00000549815 RNASE13Q5GAN3 156 aaKnown RBP8.39□□□□□ -1.07
GCN1-206ENST00000549815 FAM104AQ969W3 186 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 LRP2P98164 4655 aa8.39□□□□□ -1.07
GCN1-206ENST00000549815 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 SYCNQ0VAF6 134 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 Q6ZUT4 128 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 C20orf78Q9BR46 151 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 SMDT1Q9H4I9 107 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
GCN1-206ENST00000549815 IGLV4-69A0A075B6H9 119 aa8.37□□□□□ -1.07
GCN1-206ENST00000549815 A0A1B0GW15 77 aa8.37□□□□□ -1.07
GCN1-206ENST00000549815 A0A1B0GXF2 115 aa8.37□□□□□ -1.07
GCN1-206ENST00000549815 SMAGPQ0VAQ4 97 aa8.37□□□□□ -1.07
GCN1-206ENST00000549815 PEA15Q15121 130 aa8.37□□□□□ -1.07
GCN1-206ENST00000549815 TRAV13-1A0A0B4J241 112 aa8.36□□□□□ -1.07
GCN1-206ENST00000549815 COX7A2LO14548 114 aa8.36□□□□□ -1.07
GCN1-206ENST00000549815 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
GCN1-206ENST00000549815 CKS2P33552 79 aa8.36□□□□□ -1.07
GCN1-206ENST00000549815 PTTG1IPP53801 180 aa8.36□□□□□ -1.07
GCN1-206ENST00000549815 MALP21145 153 aa8.35□□□□□ -1.07
GCN1-206ENST00000549815 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
GCN1-206ENST00000549815 TMEM18Q96B42 140 aa8.35□□□□□ -1.07
GCN1-206ENST00000549815 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
GCN1-206ENST00000549815 D6R8Y8 96 aa8.34□□□□□ -1.07
GCN1-206ENST00000549815 NPYP01303 97 aa8.34□□□□□ -1.07
GCN1-206ENST00000549815 HBBP68871 147 aa8.34□□□□□ -1.07
GCN1-206ENST00000549815 MRPL54Q6P161 138 aaKnown RBP8.34□□□□□ -1.07
GCN1-206ENST00000549815 C5orf38Q86SI9 138 aa8.34□□□□□ -1.07
GCN1-206ENST00000549815 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
GCN1-206ENST00000549815 LINC01600Q96MT4 127 aa8.34□□□□□ -1.07
GCN1-206ENST00000549815 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
GCN1-206ENST00000549815 A0A1W2PNN7 141 aa8.33□□□□□ -1.08
GCN1-206ENST00000549815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.33□□□□□ -1.08
GCN1-206ENST00000549815 TCAPO15273 167 aa8.33□□□□□ -1.08
GCN1-206ENST00000549815 SRSF9Q13242 221 aaKnown RBP eCLIP8.33□□□□□ -1.08
GCN1-206ENST00000549815 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
GCN1-206ENST00000549815 S100A8P05109 93 aa8.32□□□□□ -1.08
GCN1-206ENST00000549815 MRPS36P82909 103 aaKnown RBP8.32□□□□□ -1.08
GCN1-206ENST00000549815 GAGE2BQ13066 116 aa8.32□□□□□ -1.08
GCN1-206ENST00000549815 OPRPNQ99935 248 aaPredicted RBP8.32□□□□□ -1.08
GCN1-206ENST00000549815 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms