RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PLEKHB2Q96CS7 222 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 WFDC10AQ9H1F0 79 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 A0A1W2PPM0 123 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 NTM-AS1Q6ZSK4 140 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 MAP1AP78559 2803 aaPredicted RBP7.07□□□□□ -1.28
RAB5B-206ENST00000549505 A0A0J9YY99 117 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 LYRM9A8MSI8 78 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 SAMD5Q5TGI4 173 aa7.07□□□□□ -1.28
RAB5B-206ENST00000549505 NOP10Q9NPE3 64 aaKnown RBP7.07□□□□□ -1.28
RAB5B-206ENST00000549505 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
RAB5B-206ENST00000549505 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
RAB5B-206ENST00000549505 HTN1P15515 57 aa7.06□□□□□ -1.28
RAB5B-206ENST00000549505 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 J3QR89 54 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 FXYD2P54710 66 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 IGLV5-39A0A0G2JS06 123 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 J3QQQ9 107 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 TIMM17BO60830 172 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 APOC4P55056 127 aa7.05□□□□□ -1.28
RAB5B-206ENST00000549505 OPRPNQ99935 248 aaPredicted RBP7.05□□□□□ -1.28
RAB5B-206ENST00000549505 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
RAB5B-206ENST00000549505 SMIM13P0DJ93 91 aa7.04□□□□□ -1.28
RAB5B-206ENST00000549505 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
RAB5B-206ENST00000549505 RPL35AP18077 110 aaKnown RBP7.04□□□□□ -1.28
RAB5B-206ENST00000549505 EGFEM1PQ0D2K5 195 aa7.04□□□□□ -1.28
RAB5B-206ENST00000549505 SPATA3Q8NHX4 192 aa7.04□□□□□ -1.28
RAB5B-206ENST00000549505 NHP2Q9NX24 153 aaKnown RBP7.04□□□□□ -1.28
RAB5B-206ENST00000549505 ZNF815PA8K554 130 aa7.04□□□□□ -1.28
RAB5B-206ENST00000549505 A0A0J9YXV3 536 aa7.03□□□□□ -1.28
RAB5B-206ENST00000549505 VSIG2Q96IQ7 327 aa7.03□□□□□ -1.28
RAB5B-206ENST00000549505 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
RAB5B-206ENST00000549505 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
RAB5B-206ENST00000549505 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
RAB5B-206ENST00000549505 Q6ZUT4 128 aa7.03□□□□□ -1.28
RAB5B-206ENST00000549505 IGHV3OR16-12A0A075B7B8 117 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 LITAFQ99732 161 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 M0QXV9 152 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 TSPAN13O95857 204 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 MIFP14174 115 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 C12orf74Q32Q52 190 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 ZFAND6Q6FIF0 208 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 SPANXDQ9BXN6 97 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 SPANXCQ9NY87 97 aa7.02□□□□□ -1.29
RAB5B-206ENST00000549505 XGP55808 180 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 HERVK_113P63121 156 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.01□□□□□ -1.29
RAB5B-206ENST00000549505 IGKV2-29A2NJV5 120 aaPredicted RBP7.01□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE5Q13069 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE6Q13070 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 TMEM170BQ5T4T1 132 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE7O76087 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE12FP0CL80 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE12GP0CL81 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE12IP0CL82 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 IGHV3-30-3P0DP02 117 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 Q8NAQ8 132 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
RAB5B-206ENST00000549505 A0A1B0GUV1 79 aa7□□□□□ -1.29
RAB5B-206ENST00000549505 APOMO95445 188 aa7□□□□□ -1.29
RAB5B-206ENST00000549505 LGALS3P17931 250 aaKnown RBP7□□□□□ -1.29
RAB5B-206ENST00000549505 TRBV6-8A0A0A6YYG3 113 aa7□□□□□ -1.29
RAB5B-206ENST00000549505 F5H768 121 aa7□□□□□ -1.29
RAB5B-206ENST00000549505 MRPL23Q16540 153 aaKnown RBP7□□□□□ -1.29
RAB5B-206ENST00000549505 HIST1H4GQ99525 98 aa7□□□□□ -1.29
RAB5B-206ENST00000549505 TRGV2A0A075B6R0 118 aa6.99□□□□□ -1.29
RAB5B-206ENST00000549505 IGLL5B9A064 214 aa6.99□□□□□ -1.29
RAB5B-206ENST00000549505 NDUFA1O15239 70 aa6.99□□□□□ -1.29
RAB5B-206ENST00000549505 C10orf126Q8N4M7 172 aa6.99□□□□□ -1.29
RAB5B-206ENST00000549505 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-206ENST00000549505 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 PRO0255Q9UI72 69 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 ERG28Q9UKR5 140 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 IGHV3-38A0A0C4DH36 116 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 NSD1Q96L73 2696 aaPredicted RBP6.98□□□□□ -1.29
RAB5B-206ENST00000549505 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 TRGV4A0A0C4DH28 118 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE12JA6NER3 117 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 EMP1P54849 157 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE4Q13068 117 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
RAB5B-206ENST00000549505 GAGE13Q4V321 117 aa6.98□□□□□ -1.29
RAB5B-206ENST00000549505 LINC01600Q96MT4 127 aa6.97□□□□□ -1.29
RAB5B-206ENST00000549505 FASNP49327 2511 aaKnown RBP6.97□□□□□ -1.29
RAB5B-206ENST00000549505 NF1P21359 2839 aa6.97□□□□□ -1.29
RAB5B-206ENST00000549505 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
RAB5B-206ENST00000549505 H3BNG1 76 aa6.96□□□□□ -1.29
RAB5B-206ENST00000549505 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.29
RAB5B-206ENST00000549505 TMEM101Q96IK0 257 aa6.96□□□□□ -1.29
RAB5B-206ENST00000549505 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 SMIM1B2RUZ4 78 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 IFITM1P13164 125 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 HIVEP2P31629 2446 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 COX6A2Q02221 97 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
RAB5B-206ENST00000549505 DEFB104AQ8WTQ1 72 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms