RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 TSKUQ8WUA8 353 aa9.02□□□□□ -0.97
TROAP-203ENST00000546735 TMEM101Q96IK0 257 aa9.02□□□□□ -0.97
TROAP-203ENST00000546735 A0A096LNI7 61 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 RAB4AP20338 218 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 AMN1Q8IY45 258 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 STPG4Q8N801 248 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 TMEM191AQ9H0A3 160 aa9.01□□□□□ -0.97
TROAP-203ENST00000546735 ZNF727A8MUV8 499 aa9□□□□□ -0.97
TROAP-203ENST00000546735 POLR2KP53803 58 aaKnown RBP9□□□□□ -0.97
TROAP-203ENST00000546735 C7orf33Q8WU49 177 aa9□□□□□ -0.97
TROAP-203ENST00000546735 MRAP2Q96G30 205 aa9□□□□□ -0.97
TROAP-203ENST00000546735 SRP19P09132 144 aaKnown RBP8.99□□□□□ -0.97
TROAP-203ENST00000546735 FAM210AQ96ND0 272 aa8.99□□□□□ -0.97
TROAP-203ENST00000546735 OSTCQ9NRP0 149 aa8.99□□□□□ -0.97
TROAP-203ENST00000546735 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
TROAP-203ENST00000546735 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 TRBV27A0A0K0K1C4 114 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 C7orf77A4D0Y5 90 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 SS18Q15532 418 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
TROAP-203ENST00000546735 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 V9GYV3 84 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 TNXBP22105 4242 aa8.97□□□□□ -0.97
TROAP-203ENST00000546735 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.98
TROAP-203ENST00000546735 RNASE13Q5GAN3 156 aaKnown RBP8.96□□□□□ -0.98
TROAP-203ENST00000546735 NUP35Q8NFH5 326 aa8.96□□□□□ -0.98
TROAP-203ENST00000546735 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
TROAP-203ENST00000546735 FCER1GP30273 86 aa8.95□□□□□ -0.98
TROAP-203ENST00000546735 RIGQ13278 110 aa8.95□□□□□ -0.98
TROAP-203ENST00000546735 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
TROAP-203ENST00000546735 NRACQ8N912 160 aa8.95□□□□□ -0.98
TROAP-203ENST00000546735 ISOC2Q96AB3 205 aa8.95□□□□□ -0.98
TROAP-203ENST00000546735 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
TROAP-203ENST00000546735 VCYO14598 125 aa8.94□□□□□ -0.98
TROAP-203ENST00000546735 RPL23P62829 140 aaKnown RBP8.94□□□□□ -0.98
TROAP-203ENST00000546735 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
TROAP-203ENST00000546735 C9JQL5 133 aa8.93□□□□□ -0.98
TROAP-203ENST00000546735 SUMO2P61956 95 aaKnown RBP8.93□□□□□ -0.98
TROAP-203ENST00000546735 ODF1Q14990 250 aa8.93□□□□□ -0.98
TROAP-203ENST00000546735 TMEM241Q24JQ0 296 aa8.93□□□□□ -0.98
TROAP-203ENST00000546735 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
TROAP-203ENST00000546735 IGLV4-69A0A075B6H9 119 aa8.92□□□□□ -0.98
TROAP-203ENST00000546735 CAMPP49913 170 aa8.92□□□□□ -0.98
TROAP-203ENST00000546735 ADIRFQ15847 76 aa8.92□□□□□ -0.98
TROAP-203ENST00000546735 MRPL51Q4U2R6 128 aaKnown RBP8.92□□□□□ -0.98
TROAP-203ENST00000546735 NAT8BQ9UHF3 227 aa8.92□□□□□ -0.98
TROAP-203ENST00000546735 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 MALP21145 153 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 GAGE2BQ13066 116 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 FAM104BQ5XKR9 115 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 Q6ZUT4 128 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 C5orf38Q86SI9 138 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
TROAP-203ENST00000546735 C1orf196B1AJZ1 125 aa8.9□□□□□ -0.98
TROAP-203ENST00000546735 COX7A2LO14548 114 aa8.9□□□□□ -0.98
TROAP-203ENST00000546735 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.98
TROAP-203ENST00000546735 KIR2DL4Q99706 377 aa8.9□□□□□ -0.98
TROAP-203ENST00000546735 PPP1R17O96001 155 aa8.89□□□□□ -0.99
TROAP-203ENST00000546735 PTTG1IPP53801 180 aa8.89□□□□□ -0.99
TROAP-203ENST00000546735 FAM74A3Q4VXF1 159 aa8.89□□□□□ -0.99
TROAP-203ENST00000546735 LINC01600Q96MT4 127 aa8.89□□□□□ -0.99
TROAP-203ENST00000546735 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
TROAP-203ENST00000546735 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
TROAP-203ENST00000546735 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
TROAP-203ENST00000546735 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
TROAP-203ENST00000546735 SMIM27A0A1W2PRY6 76 aa8.88□□□□□ -0.99
TROAP-203ENST00000546735 NAT8Q9UHE5 227 aa8.88□□□□□ -0.99
TROAP-203ENST00000546735 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
TROAP-203ENST00000546735 PPP1R2P9O14990 202 aa8.87□□□□□ -0.99
TROAP-203ENST00000546735 CKS2P33552 79 aa8.87□□□□□ -0.99
TROAP-203ENST00000546735 RPL39P62891 51 aaKnown RBP8.87□□□□□ -0.99
TROAP-203ENST00000546735 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 TNFRSF6BO95407 300 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 MRPL54Q6P161 138 aaKnown RBP8.86□□□□□ -0.99
TROAP-203ENST00000546735 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 Q6ZRP5 223 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 TMEM18Q96B42 140 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
TROAP-203ENST00000546735 C20orf78Q9BR46 151 aa8.86□□□□□ -0.99
TROAP-203ENST00000546735 TRBV24-1A0A075B6N3 115 aa8.85□□□□□ -0.99
TROAP-203ENST00000546735 LINC00862A6NCI5 91 aa8.85□□□□□ -0.99
TROAP-203ENST00000546735 D6R8Y8 96 aa8.85□□□□□ -0.99
TROAP-203ENST00000546735 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.85□□□□□ -0.99
TROAP-203ENST00000546735 RPL18AQ02543 176 aaKnown RBP8.85□□□□□ -0.99
TROAP-203ENST00000546735 SPAG11BQ08648 103 aa8.85□□□□□ -0.99
TROAP-203ENST00000546735 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
TROAP-203ENST00000546735 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
TROAP-203ENST00000546735 TIMM21Q9BVV7 248 aa8.85□□□□□ -0.99
TROAP-203ENST00000546735 APOMO95445 188 aa8.84□□□□□ -0.99
TROAP-203ENST00000546735 NPYP01303 97 aa8.84□□□□□ -0.99
TROAP-203ENST00000546735 IFITM2Q01629 132 aa8.84□□□□□ -0.99
TROAP-203ENST00000546735 PEA15Q15121 130 aa8.84□□□□□ -0.99
TROAP-203ENST00000546735 C2orf48Q96LS8 159 aa8.84□□□□□ -0.99
TROAP-203ENST00000546735 SMIM2Q9BVW6 85 aa8.84□□□□□ -0.99
TROAP-203ENST00000546735 LRP2P98164 4655 aa8.83□□□□□ -1
TROAP-203ENST00000546735 A0A1B0GW15 77 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms