RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 IGHV1-58A0A0C4DH39 117 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 RS1O15537 224 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 NOP10Q9NPE3 64 aaKnown RBP11.26□□□□□ -0.61
SCAP-215ENST00000545718 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 A0A0U1RRA0 63 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 DAND5Q8N907 189 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 HIVEP2P31629 2446 aa11.26□□□□□ -0.61
SCAP-215ENST00000545718 GAGE12HA6NDE8 117 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 GAGE12JA6NER3 117 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 NDUFA7O95182 113 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 GAGE4Q13068 117 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 GAGE5Q13069 117 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
SCAP-215ENST00000545718 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 ADAMTSL4-AS1Q5T5F5 129 aa11.25□□□□□ -0.61
SCAP-215ENST00000545718 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
SCAP-215ENST00000545718 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 LINC01006Q8NI28 216 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 DNAJC30Q96LL9 226 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 PDZD2O15018 2839 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 LINC00694P0DN24 101 aa11.24□□□□□ -0.61
SCAP-215ENST00000545718 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
SCAP-215ENST00000545718 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
SCAP-215ENST00000545718 TMEM263Q8WUH6 116 aaKnown RBP11.23□□□□□ -0.61
SCAP-215ENST00000545718 SIGMAR1Q99720 223 aa11.23□□□□□ -0.61
SCAP-215ENST00000545718 TRGV2A0A075B6R0 118 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 TRAV25A0A0B4J276 109 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 GAGE7O76087 117 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 FHL3Q13643 280 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 FOXI1Q12951 378 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 TEX29Q8N6K0 151 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 TRBV20-1A0A075B6N2 111 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 C9JAW5 83 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 PLA2G2AP14555 144 aa11.22□□□□□ -0.61
SCAP-215ENST00000545718 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.21□□□□□ -0.61
SCAP-215ENST00000545718 CRYBA4P53673 196 aa11.21□□□□□ -0.61
SCAP-215ENST00000545718 COX6A2Q02221 97 aa11.21□□□□□ -0.61
SCAP-215ENST00000545718 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.21□□□□□ -0.61
SCAP-215ENST00000545718 K7EQD1 137 aa11.21□□□□□ -0.62
SCAP-215ENST00000545718 IGKV3OR2-268A0A0C4DH90 116 aa11.2□□□□□ -0.62
SCAP-215ENST00000545718 LITAFQ99732 161 aa11.19□□□□□ -0.62
SCAP-215ENST00000545718 NBEAL2Q6ZNJ1 2754 aa11.19□□□□□ -0.62
SCAP-215ENST00000545718 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
SCAP-215ENST00000545718 TMEM101Q96IK0 257 aa11.19□□□□□ -0.62
SCAP-215ENST00000545718 LOC100131303A0A0U1RQF7 123 aa11.18□□□□□ -0.62
SCAP-215ENST00000545718 NTM-AS1Q6ZSK4 140 aa11.18□□□□□ -0.62
SCAP-215ENST00000545718 J3QKU1 62 aa11.18□□□□□ -0.62
SCAP-215ENST00000545718 SLC25A20O43772 301 aa11.17□□□□□ -0.62
SCAP-215ENST00000545718 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
SCAP-215ENST00000545718 TEN1Q86WV5 123 aa11.17□□□□□ -0.62
SCAP-215ENST00000545718 Q9H8V8 135 aa11.17□□□□□ -0.62
SCAP-215ENST00000545718 OTOGQ6ZRI0 2925 aa11.17□□□□□ -0.62
SCAP-215ENST00000545718 UBE2L6O14933 153 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 MIAQ16674 131 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 LINC00242Q5T6M2 205 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 ZFAND6Q6FIF0 208 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 SMR3AQ99954 134 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 TRAV4A0A0B4J268 109 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 TRIAP1O43715 76 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
SCAP-215ENST00000545718 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
SCAP-215ENST00000545718 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
SCAP-215ENST00000545718 KRTAP1-1Q07627 177 aa11.15□□□□□ -0.62
SCAP-215ENST00000545718 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
SCAP-215ENST00000545718 PPDPFLQ8WWR9 84 aa11.15□□□□□ -0.62
SCAP-215ENST00000545718 HERVK_113P63121 156 aa11.14□□□□□ -0.63
SCAP-215ENST00000545718 IL17DQ8TAD2 202 aa11.14□□□□□ -0.63
SCAP-215ENST00000545718 DAZ2Q13117 558 aaKnown RBP11.14□□□□□ -0.63
SCAP-215ENST00000545718 DAZ4Q86SG3 579 aaKnown RBP11.14□□□□□ -0.63
SCAP-215ENST00000545718 DAZ3Q9NR90 486 aaKnown RBP11.14□□□□□ -0.63
SCAP-215ENST00000545718 TRBV10-1A0A0K0K1A3 114 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 RNASE1P07998 156 aaKnown RBP11.13□□□□□ -0.63
SCAP-215ENST00000545718 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 TIRAPP58753 221 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
SCAP-215ENST00000545718 ATP6V0E2Q8NHE4 81 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 SPANXDQ9BXN6 97 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 SPANXCQ9NY87 97 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 ATXN8Q156A1 80 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
SCAP-215ENST00000545718 DEFB130BP0DP73 79 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 DEFB130AP0DP74 79 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 RPL13AP40429 203 aaKnown RBP11.12□□□□□ -0.63
SCAP-215ENST00000545718 ICOSQ9Y6W8 199 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 IGLV1-51P01701 117 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 GAGE6Q13070 117 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 C16orf74Q96GX8 76 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
SCAP-215ENST00000545718 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
SCAP-215ENST00000545718 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms