RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 TRBV6-1A0A0K0K1D8 114 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 LTAP01374 205 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 UBE2D3P61077 147 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 UBE2G1P62253 170 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 UBE2D2P62837 147 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 Q0VG73 95 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 UBE2V1Q13404 147 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
USP28-215ENST00000545608 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
USP28-215ENST00000545608 TRBV7-3A0A075B6L6 115 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 A0A087WX48 190 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 GAGE10A6NGK3 116 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
USP28-215ENST00000545608 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
USP28-215ENST00000545608 Q6ZN92 141 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 OR10G8Q8NGN5 311 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 DEFB104AQ8WTQ1 72 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
USP28-215ENST00000545608 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 LAMTOR2Q9Y2Q5 125 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 PAM16Q9Y3D7 125 aa5.52□□□□□ -1.53
USP28-215ENST00000545608 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 K7ERU9 68 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 PAGE4O60829 102 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 PPBPP02775 128 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
USP28-215ENST00000545608 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 NEXN-AS1Q8NBZ9 246 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 OR10AG1Q8NH19 301 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 CIRBP-AS1Q8TBR5 109 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 SMIM12Q96EX1 92 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 CHAC1Q9BUX1 264 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 GNB1LQ9BYB4 327 aa5.51□□□□□ -1.53
USP28-215ENST00000545608 MUC21A0A0G2JKD1 596 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 MUC21A0A140T8X8 626 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 KRTDAPP60985 99 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 SPATA45Q537H7 98 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 PRR27Q6MZM9 219 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 LINC01551Q86U37 167 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 VPS25Q9BRG1 176 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 ALKBH7Q9BT30 221 aaPredicted RBP5.5□□□□□ -1.53
USP28-215ENST00000545608 MLST8Q9BVC4 326 aa5.5□□□□□ -1.53
USP28-215ENST00000545608 HSBP1L1C9JCN9 74 aa5.49□□□□□ -1.53
USP28-215ENST00000545608 SNAI2O43623 268 aa5.49□□□□□ -1.53
USP28-215ENST00000545608 ZNF56Q15929 161 aa5.49□□□□□ -1.53
USP28-215ENST00000545608 MPV17L2Q567V2 206 aa5.49□□□□□ -1.53
USP28-215ENST00000545608 NTM-AS1Q6ZSK4 140 aa5.49□□□□□ -1.53
USP28-215ENST00000545608 DAZAP1Q96EP5 407 aaKnown RBP5.49□□□□□ -1.53
USP28-215ENST00000545608 SERF1AO75920 110 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 HLA-DQA1P01909 254 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 ANGP03950 147 aaKnown RBP5.48□□□□□ -1.53
USP28-215ENST00000545608 IGLC3P0DOY3 106 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 RBX1P62877 108 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 VAMP3Q15836 100 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 SPANXN1Q5VSR9 72 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 RASL11AQ6T310 242 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 CHCHD5Q9BSY4 110 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
USP28-215ENST00000545608 KIF25-AS1Q9Y6Z4 181 aa5.48□□□□□ -1.53
USP28-215ENST00000545608 USP17L23D6RBM5 183 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 PRYO14603 147 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 IGLV2-8P01709 118 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 CRPP02741 224 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 PRSS1P07477 247 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 OR5AL1P0C617 328 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 AMTP48728 403 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 C14orf177Q52M58 125 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
USP28-215ENST00000545608 CCL25O15444 150 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 CTRLP40313 264 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 GAGE6Q13070 117 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 MIAQ16674 131 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 CLPSL2Q6UWE3 100 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 DERL1Q9BUN8 251 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 PRR34Q9NV39 138 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 NAT8BQ9UHF3 227 aa5.46□□□□□ -1.54
USP28-215ENST00000545608 OXTP01178 125 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 TMEM97Q5BJF2 176 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 GTF2H5Q6ZYL4 71 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 STPG4Q8N801 248 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 C9orf163Q8N9P6 203 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 AP1S3Q96PC3 154 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 ST20Q9HBF5 79 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 OSTCQ9NRP0 149 aa5.45□□□□□ -1.54
USP28-215ENST00000545608 TRBV25-1A0A075B6N4 114 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 PANO1I0J062 215 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 M0QY20 66 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 HSBP1O75506 76 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 APCSP02743 223 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 IGLC6P0CF74 106 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 SMIM17P0DL12 118 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 PMCHP20382 165 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 GNG4P50150 75 aa5.44□□□□□ -1.54
USP28-215ENST00000545608 RPL37AP61513 92 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms