RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 HERC2O95714 4834 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 IGLV4-60A0A075B6I1 120 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 TRGC2P03986 189 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 REG3AQ06141 175 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 LINC00269Q8N2A0 174 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 AP5S1Q9NUS5 200 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 UBE2D4Q9Y2X8 147 aa7.9□□□□□ -1.14
SNHG1-221ENST00000544983 CCL25O15444 150 aa7.89□□□□□ -1.15
SNHG1-221ENST00000544983 LINC00614P0C842 121 aa7.89□□□□□ -1.15
SNHG1-221ENST00000544983 MRPS36P82909 103 aaKnown RBP7.89□□□□□ -1.15
SNHG1-221ENST00000544983 ZNF664Q8N3J9 261 aa7.89□□□□□ -1.15
SNHG1-221ENST00000544983 CDC42SE2Q9NRR3 84 aa7.89□□□□□ -1.15
SNHG1-221ENST00000544983 RTL8CO15255 209 aa7.88□□□□□ -1.15
SNHG1-221ENST00000544983 PAPPA-AS1Q5QFB9 102 aa7.88□□□□□ -1.15
SNHG1-221ENST00000544983 ENHOQ6UWT2 76 aa7.88□□□□□ -1.15
SNHG1-221ENST00000544983 C2orf66Q6UXQ4 117 aa7.88□□□□□ -1.15
SNHG1-221ENST00000544983 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-221ENST00000544983 CHCHD1Q96BP2 118 aaKnown RBP7.88□□□□□ -1.15
SNHG1-221ENST00000544983 C1orf43Q9BWL3 253 aa7.88□□□□□ -1.15
SNHG1-221ENST00000544983 Q9HAA7 133 aa7.88□□□□□ -1.15
SNHG1-221ENST00000544983 PSCAO43653 123 aa7.87□□□□□ -1.15
SNHG1-221ENST00000544983 RPL39P62891 51 aaKnown RBP7.87□□□□□ -1.15
SNHG1-221ENST00000544983 TOMM6Q96B49 74 aa7.87□□□□□ -1.15
SNHG1-221ENST00000544983 IGKV2D-24A0A075B6R9 120 aa7.86□□□□□ -1.15
SNHG1-221ENST00000544983 TIMM17AQ99595 171 aa7.86□□□□□ -1.15
SNHG1-221ENST00000544983 EREGO14944 169 aa7.85□□□□□ -1.15
SNHG1-221ENST00000544983 Q6ZN92 141 aa7.85□□□□□ -1.15
SNHG1-221ENST00000544983 ERASQ7Z444 233 aa7.85□□□□□ -1.15
SNHG1-221ENST00000544983 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
SNHG1-221ENST00000544983 TMEM141Q96I45 108 aa7.85□□□□□ -1.15
SNHG1-221ENST00000544983 PRSS29PA6NIE9 313 aa7.84□□□□□ -1.15
SNHG1-221ENST00000544983 IGIPA6NJ69 53 aa7.84□□□□□ -1.15
SNHG1-221ENST00000544983 C1orf196B1AJZ1 125 aa7.84□□□□□ -1.15
SNHG1-221ENST00000544983 SS18Q15532 418 aa7.84□□□□□ -1.15
SNHG1-221ENST00000544983 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 HBDP02042 147 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 CLPSL2Q6UWE3 100 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 Q6ZUT4 128 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 URB1-AS1Q96HZ7 61 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 C2orf88Q9BSF0 95 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 VCX2Q9H322 139 aa7.83□□□□□ -1.16
SNHG1-221ENST00000544983 IGLV4-3A0A075B6K6 122 aa7.82□□□□□ -1.16
SNHG1-221ENST00000544983 TEX43Q6ZNM6 134 aa7.82□□□□□ -1.16
SNHG1-221ENST00000544983 IGKV3OR2-268A0A0C4DH90 116 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BKO60814 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HSBP1O75506 76 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 ATP5LO75964 103 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BJP06899 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BOP23527 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BBP33778 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 TNP2Q05952 138 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 C14orf177Q52M58 125 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-221ENST00000544983 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 AMELXQ99217 191 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
SNHG1-221ENST00000544983 IGLV10-54A0A075B6I4 117 aa7.8□□□□□ -1.16
SNHG1-221ENST00000544983 A0A087WTM6 91 aa7.8□□□□□ -1.16
SNHG1-221ENST00000544983 IFITM10A6NMD0 228 aa7.8□□□□□ -1.16
SNHG1-221ENST00000544983 SEC11AP67812 179 aa7.8□□□□□ -1.16
SNHG1-221ENST00000544983 CD164L2Q6UWJ8 174 aa7.8□□□□□ -1.16
SNHG1-221ENST00000544983 A0A096LNJ9 63 aa7.79□□□□□ -1.16
SNHG1-221ENST00000544983 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
SNHG1-221ENST00000544983 LRCOL1A6NCL2 159 aa7.79□□□□□ -1.16
SNHG1-221ENST00000544983 SERF1AO75920 110 aa7.79□□□□□ -1.16
SNHG1-221ENST00000544983 PDZD11Q5EBL8 140 aa7.79□□□□□ -1.16
SNHG1-221ENST00000544983 CFAP161Q6P656 301 aa7.79□□□□□ -1.16
SNHG1-221ENST00000544983 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-221ENST00000544983 GAGE12HA6NDE8 117 aa7.78□□□□□ -1.16
SNHG1-221ENST00000544983 XCL1P47992 114 aa7.78□□□□□ -1.16
SNHG1-221ENST00000544983 RNASE13Q5GAN3 156 aaKnown RBP7.78□□□□□ -1.16
SNHG1-221ENST00000544983 MAPKAPK5-AS1Q8N8E1 139 aa7.78□□□□□ -1.16
SNHG1-221ENST00000544983 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-221ENST00000544983 PGPEP1Q9NXJ5 209 aa7.78□□□□□ -1.16
SNHG1-221ENST00000544983 UBE2D1P51668 147 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 FOXI1Q12951 378 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 PMVKQ15126 192 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 COA6Q5JTJ3 125 aaKnown RBP7.77□□□□□ -1.17
SNHG1-221ENST00000544983 CDPF1Q6NVV7 123 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 LINC00173Q6ZV60 143 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 FAM19A3Q7Z5A8 133 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 BAALCQ8WXS3 180 aa7.77□□□□□ -1.17
SNHG1-221ENST00000544983 FRAS1Q86XX4 4008 aa7.76□□□□□ -1.17
SNHG1-221ENST00000544983 COX7A2LO14548 114 aa7.76□□□□□ -1.17
SNHG1-221ENST00000544983 PMCHL1Q16048 86 aa7.76□□□□□ -1.17
SNHG1-221ENST00000544983 Q8N814 137 aa7.76□□□□□ -1.17
SNHG1-221ENST00000544983 PACRGQ96M98 296 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-221ENST00000544983 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
SNHG1-221ENST00000544983 DNAH2Q9P225 4427 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 A0A1B0GVY2 172 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms