RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 IGLV4-69A0A075B6H9 119 aa12.74□□□□□ -0.37
CHERP-202ENST00000544299 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
CHERP-202ENST00000544299 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
CHERP-202ENST00000544299 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 C9orf118A6NHY6 69 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
CHERP-202ENST00000544299 GAGE4Q13068 117 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 GAGE5Q13069 117 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 CEND1Q8N111 149 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
CHERP-202ENST00000544299 PRADC1Q9BSG0 188 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 SPANXA1Q9NS26 97 aa12.73□□□□□ -0.37
CHERP-202ENST00000544299 SMIM13P0DJ93 91 aa12.72□□□□□ -0.37
CHERP-202ENST00000544299 VCX2Q9H322 139 aa12.72□□□□□ -0.37
CHERP-202ENST00000544299 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
CHERP-202ENST00000544299 GCSHP23434 173 aa12.71□□□□□ -0.37
CHERP-202ENST00000544299 TM2D3Q9BRN9 247 aa12.71□□□□□ -0.37
CHERP-202ENST00000544299 KRTAP21-3Q3LHN1 58 aa12.71□□□□□ -0.38
CHERP-202ENST00000544299 DEFB121Q5J5C9 76 aa12.71□□□□□ -0.38
CHERP-202ENST00000544299 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.38
CHERP-202ENST00000544299 CHCHD7Q9BUK0 85 aa12.71□□□□□ -0.38
CHERP-202ENST00000544299 SMAGPQ0VAQ4 97 aa12.7□□□□□ -0.38
CHERP-202ENST00000544299 TENM3Q9P273 2699 aa12.7□□□□□ -0.38
CHERP-202ENST00000544299 COTL1Q14019 142 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 C12orf74Q32Q52 190 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 GTF2H5Q6ZYL4 71 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 IGLV4-3A0A075B6K6 122 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 ATP5G1P05496 136 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 DAZ4Q86SG3 579 aaKnown RBP12.69□□□□□ -0.38
CHERP-202ENST00000544299 HIST1H4GQ99525 98 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 DAZ3Q9NR90 486 aaKnown RBP12.69□□□□□ -0.38
CHERP-202ENST00000544299 PRO0255Q9UI72 69 aa12.69□□□□□ -0.38
CHERP-202ENST00000544299 ZNF815PA8K554 130 aa12.68□□□□□ -0.38
CHERP-202ENST00000544299 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 A6NJY4 79 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 CCL25O15444 150 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 TMEM170BQ5T4T1 132 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 NTM-AS1Q6ZSK4 140 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 Q6ZVH6 145 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 MRAPQ8TCY5 172 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 AMELXQ99217 191 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
CHERP-202ENST00000544299 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
CHERP-202ENST00000544299 GYPEP15421 78 aa12.66□□□□□ -0.38
CHERP-202ENST00000544299 VSIG2Q96IQ7 327 aa12.66□□□□□ -0.38
CHERP-202ENST00000544299 SCGB1D4Q6XE38 83 aa12.66□□□□□ -0.38
CHERP-202ENST00000544299 PLEKHB2Q96CS7 222 aa12.66□□□□□ -0.38
CHERP-202ENST00000544299 AMMECR1LQ6DCA0 310 aa12.65□□□□□ -0.38
CHERP-202ENST00000544299 LEPROTO15243 131 aa12.64□□□□□ -0.39
CHERP-202ENST00000544299 PAX4O43316 350 aa12.64□□□□□ -0.39
CHERP-202ENST00000544299 LGALS3P17931 250 aaKnown RBP12.64□□□□□ -0.39
CHERP-202ENST00000544299 FXYD2P54710 66 aa12.64□□□□□ -0.39
CHERP-202ENST00000544299 MRPS36P82909 103 aaKnown RBP12.64□□□□□ -0.39
CHERP-202ENST00000544299 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
CHERP-202ENST00000544299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
CHERP-202ENST00000544299 TMEM223A0PJW6 202 aa12.64□□□□□ -0.39
CHERP-202ENST00000544299 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
CHERP-202ENST00000544299 F5H768 121 aa12.64□□□□□ -0.39
CHERP-202ENST00000544299 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
CHERP-202ENST00000544299 A0A0J9YY99 117 aa12.63□□□□□ -0.39
CHERP-202ENST00000544299 GAGE10A6NGK3 116 aa12.63□□□□□ -0.39
CHERP-202ENST00000544299 HTN3P15516 51 aa12.63□□□□□ -0.39
CHERP-202ENST00000544299 OPRPNQ99935 248 aaPredicted RBP12.63□□□□□ -0.39
CHERP-202ENST00000544299 GTSF1LQ9H1H1 148 aa12.63□□□□□ -0.39
CHERP-202ENST00000544299 UBE2D4Q9Y2X8 147 aa12.63□□□□□ -0.39
CHERP-202ENST00000544299 J3QQQ9 107 aa12.62□□□□□ -0.39
CHERP-202ENST00000544299 FABP2P12104 132 aa12.62□□□□□ -0.39
CHERP-202ENST00000544299 TRAV26-1A0A087WT03 109 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 A0A1B0GWB2 263 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 A0A1W2PPM0 123 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 H3BUT2 72 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 ZNF22P17026 224 aaPredicted RBP12.61□□□□□ -0.39
CHERP-202ENST00000544299 OR5A1Q8NGJ0 315 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 HUWE1Q7Z6Z7 4374 aaKnown RBP12.61□□□□□ -0.39
CHERP-202ENST00000544299 TINCRA0A1B0GVN0 87 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 CEMP1Q6PRD7 247 aaPredicted RBP12.61□□□□□ -0.39
CHERP-202ENST00000544299 Q6ZTC4 211 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 NHP2Q9NX24 153 aaKnown RBP12.61□□□□□ -0.39
CHERP-202ENST00000544299 DNHD1Q96M86 4753 aa12.61□□□□□ -0.39
CHERP-202ENST00000544299 K7EP34 96 aa12.6□□□□□ -0.39
CHERP-202ENST00000544299 ATP6V0E2Q8NHE4 81 aa12.6□□□□□ -0.39
CHERP-202ENST00000544299 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
CHERP-202ENST00000544299 K7EP13 123 aa12.59□□□□□ -0.39
CHERP-202ENST00000544299 NANOS2P60321 138 aaKnown RBP12.59□□□□□ -0.39
CHERP-202ENST00000544299 SRSF9Q13242 221 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHERP-202ENST00000544299 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
CHERP-202ENST00000544299 DGAT2L7PQ6IED9 249 aa12.58□□□□□ -0.4
CHERP-202ENST00000544299 C11orf45Q8TAV5 145 aa12.58□□□□□ -0.4
CHERP-202ENST00000544299 RAB37Q96AX2 223 aa12.58□□□□□ -0.4
CHERP-202ENST00000544299 TMEM243Q9BU79 118 aa12.58□□□□□ -0.4
CHERP-202ENST00000544299 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
CHERP-202ENST00000544299 H7C423 109 aa12.57□□□□□ -0.4
CHERP-202ENST00000544299 TIRAPP58753 221 aa12.56□□□□□ -0.4
CHERP-202ENST00000544299 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
CHERP-202ENST00000544299 A0A096LPF7 62 aa12.56□□□□□ -0.4
CHERP-202ENST00000544299 Q6ZUT4 128 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms