RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 OTOGQ6ZRI0 2925 aa10.76□□□□□ -0.69
DDX55-209ENST00000542286 M0QXV9 152 aa10.76□□□□□ -0.69
DDX55-209ENST00000542286 LINC01587Q99440 93 aa10.76□□□□□ -0.69
DDX55-209ENST00000542286 IGHV3-33P01772 117 aa10.75□□□□□ -0.69
DDX55-209ENST00000542286 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
DDX55-209ENST00000542286 WFDC10AQ9H1F0 79 aa10.75□□□□□ -0.69
DDX55-209ENST00000542286 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
DDX55-209ENST00000542286 C4orf3Q8WVX3 66 aa10.75□□□□□ -0.69
DDX55-209ENST00000542286 Q8N2B8 174 aa10.74□□□□□ -0.69
DDX55-209ENST00000542286 TEX49A0A1B0GTD5 131 aa10.74□□□□□ -0.69
DDX55-209ENST00000542286 TRGV11A0A075B6L2 103 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 J3QQQ9 107 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 Q6Q795 121 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 AMELXQ99217 191 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 ODF3L2Q3SX64 289 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
DDX55-209ENST00000542286 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
DDX55-209ENST00000542286 CITED2Q99967 270 aaPredicted RBP10.73□□□□□ -0.69
DDX55-209ENST00000542286 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
DDX55-209ENST00000542286 PEMTQ9UBM1 199 aa10.72□□□□□ -0.69
DDX55-209ENST00000542286 TENM1Q9UKZ4 2725 aa10.72□□□□□ -0.69
DDX55-209ENST00000542286 LGALS3P17931 250 aaKnown RBP10.72□□□□□ -0.69
DDX55-209ENST00000542286 SMR3AQ99954 134 aa10.72□□□□□ -0.69
DDX55-209ENST00000542286 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.71□□□□□ -0.69
DDX55-209ENST00000542286 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 IGKV2-29A2NJV5 120 aaPredicted RBP10.71□□□□□ -0.69
DDX55-209ENST00000542286 Q1RN00 199 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 LINC01620Q4KN68 170 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 C20orf203Q8NBC4 194 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 I3L3M4 83 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 IGHV3-53P01767 116 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 ATXN8Q156A1 80 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 LRRC75A-AS1Q8N1F1 130 aa10.71□□□□□ -0.69
DDX55-209ENST00000542286 A8MZ25 164 aa10.71□□□□□ -0.7
DDX55-209ENST00000542286 TIMM17AQ99595 171 aa10.71□□□□□ -0.7
DDX55-209ENST00000542286 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
DDX55-209ENST00000542286 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
DDX55-209ENST00000542286 IGLV4-3A0A075B6K6 122 aa10.7□□□□□ -0.7
DDX55-209ENST00000542286 YAE1D1Q9NRH1 226 aa10.7□□□□□ -0.7
DDX55-209ENST00000542286 PLA2G2AP14555 144 aa10.69□□□□□ -0.7
DDX55-209ENST00000542286 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
DDX55-209ENST00000542286 A0A0B4J2C4 111 aa10.69□□□□□ -0.7
DDX55-209ENST00000542286 MEIG1Q5JSS6 88 aa10.69□□□□□ -0.7
DDX55-209ENST00000542286 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
DDX55-209ENST00000542286 TMEM141Q96I45 108 aa10.69□□□□□ -0.7
DDX55-209ENST00000542286 SPXQ9BT56 116 aa10.69□□□□□ -0.7
DDX55-209ENST00000542286 M0R2P5 195 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 CCL24O00175 119 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 TRBV10-2A0A0K0K1G8 114 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 KRTAP1-1Q07627 177 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
DDX55-209ENST00000542286 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
DDX55-209ENST00000542286 ZNF22P17026 224 aaPredicted RBP10.66□□□□□ -0.7
DDX55-209ENST00000542286 ZNF415Q09FC8 603 aa10.66□□□□□ -0.7
DDX55-209ENST00000542286 C1orf158Q8N1D5 194 aa10.66□□□□□ -0.7
DDX55-209ENST00000542286 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
DDX55-209ENST00000542286 C2orf82Q6UX34 121 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 STHQ8IWL8 128 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 LINC00467Q9BRT7 94 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 TRRAPQ9Y4A5 3859 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 TRGV1A0A0A0MS02 117 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.65□□□□□ -0.7
DDX55-209ENST00000542286 TRIAP1O43715 76 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 INSP01308 110 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 RHOHQ15669 191 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 LINC01006Q8NI28 216 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 LINC01600Q96MT4 127 aa10.65□□□□□ -0.7
DDX55-209ENST00000542286 LEPROTO15243 131 aa10.65□□□□□ -0.71
DDX55-209ENST00000542286 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.71
DDX55-209ENST00000542286 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.71
DDX55-209ENST00000542286 A8MTW9 85 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 NDUFA7O95182 113 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 Q6ZTI0 123 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 C3orf56Q8N813 242 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
DDX55-209ENST00000542286 ATRQ13535 2644 aa10.63□□□□□ -0.71
DDX55-209ENST00000542286 NPC2P61916 151 aa10.63□□□□□ -0.71
DDX55-209ENST00000542286 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
DDX55-209ENST00000542286 H7C423 109 aa10.62□□□□□ -0.71
DDX55-209ENST00000542286 PRSS2P07478 247 aa10.6□□□□□ -0.71
DDX55-209ENST00000542286 A0A0J9YXY3 114 aa10.6□□□□□ -0.71
DDX55-209ENST00000542286 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
DDX55-209ENST00000542286 MRPL23Q16540 153 aaKnown RBP10.6□□□□□ -0.71
DDX55-209ENST00000542286 NOP10Q9NPE3 64 aaKnown RBP10.6□□□□□ -0.71
DDX55-209ENST00000542286 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
DDX55-209ENST00000542286 IGHV3-30-3P0DP02 117 aa10.59□□□□□ -0.71
DDX55-209ENST00000542286 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.59□□□□□ -0.71
DDX55-209ENST00000542286 ICOSQ9Y6W8 199 aa10.59□□□□□ -0.71
DDX55-209ENST00000542286 GIG44P09565 113 aaPredicted RBP10.59□□□□□ -0.71
DDX55-209ENST00000542286 NSD1Q96L73 2696 aaPredicted RBP10.58□□□□□ -0.72
DDX55-209ENST00000542286 LOC100131303A0A0U1RQF7 123 aa10.58□□□□□ -0.72
DDX55-209ENST00000542286 H3BT86 120 aa10.58□□□□□ -0.72
DDX55-209ENST00000542286 TMEM86BQ8N661 226 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms