RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 HLA-DQA1P01909 254 aa6.34□□□□□ -1.39
YBX3-212ENST00000542002 PRSS1P07477 247 aa6.34□□□□□ -1.39
YBX3-212ENST00000542002 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
YBX3-212ENST00000542002 ATP5L2Q7Z4Y8 100 aa6.34□□□□□ -1.39
YBX3-212ENST00000542002 C20orf78Q9BR46 151 aa6.34□□□□□ -1.39
YBX3-212ENST00000542002 SEC11CQ9BY50 192 aa6.34□□□□□ -1.39
YBX3-212ENST00000542002 TRAV8-4A0A0B4J246 113 aa6.33□□□□□ -1.4
YBX3-212ENST00000542002 PPP1R17O96001 155 aa6.33□□□□□ -1.4
YBX3-212ENST00000542002 S100A8P05109 93 aa6.33□□□□□ -1.4
YBX3-212ENST00000542002 AMMECR1LQ6DCA0 310 aa6.33□□□□□ -1.4
YBX3-212ENST00000542002 FAM104AQ969W3 186 aa6.33□□□□□ -1.4
YBX3-212ENST00000542002 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
YBX3-212ENST00000542002 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 GAGE12HA6NDE8 117 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 TCAPO15273 167 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 SLPIP03973 132 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 RPL32P62910 135 aaKnown RBP6.32□□□□□ -1.4
YBX3-212ENST00000542002 TMEM136Q6ZRR5 245 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 MRPL52Q86TS9 123 aaKnown RBP6.32□□□□□ -1.4
YBX3-212ENST00000542002 Q8N1X5 172 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 BTF3L4Q96K17 158 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 IMMP2LQ96T52 175 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 UBE2D4Q9Y2X8 147 aa6.32□□□□□ -1.4
YBX3-212ENST00000542002 C7orf77A4D0Y5 90 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 PPBPP02775 128 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 SMR3BP02814 79 aaPredicted RBP6.31□□□□□ -1.4
YBX3-212ENST00000542002 ZNF25P17030 456 aaPredicted RBP6.31□□□□□ -1.4
YBX3-212ENST00000542002 FCER1GP30273 86 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 Q6ZSA8 131 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 ORMDL3Q8N138 153 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 ZNF664Q8N3J9 261 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
YBX3-212ENST00000542002 PRELID3AQ96N28 172 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 KIR2DL4Q99706 377 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 SMIM2Q9BVW6 85 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 CTDSP1Q9GZU7 261 aa6.31□□□□□ -1.4
YBX3-212ENST00000542002 LINC00959A0A1B0GUT2 108 aa6.3□□□□□ -1.4
YBX3-212ENST00000542002 PRSS47A8MTI9 375 aa6.3□□□□□ -1.4
YBX3-212ENST00000542002 PHOX2AO14813 284 aa6.3□□□□□ -1.4
YBX3-212ENST00000542002 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
YBX3-212ENST00000542002 FOXI1Q12951 378 aa6.3□□□□□ -1.4
YBX3-212ENST00000542002 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
YBX3-212ENST00000542002 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
YBX3-212ENST00000542002 OPRPNQ99935 248 aaPredicted RBP6.3□□□□□ -1.4
YBX3-212ENST00000542002 CARHSP1Q9Y2V2 147 aaKnown RBP6.3□□□□□ -1.4
YBX3-212ENST00000542002 LOC389332A0A1B0GUA5 103 aa6.29□□□□□ -1.4
YBX3-212ENST00000542002 CLRN3Q8NCR9 226 aa6.29□□□□□ -1.4
YBX3-212ENST00000542002 TMEM101Q96IK0 257 aa6.29□□□□□ -1.4
YBX3-212ENST00000542002 CSDC2Q9Y534 153 aaKnown RBP6.29□□□□□ -1.4
YBX3-212ENST00000542002 CCL25O15444 150 aa6.28□□□□□ -1.4
YBX3-212ENST00000542002 XCL1P47992 114 aa6.28□□□□□ -1.4
YBX3-212ENST00000542002 KIAA1644Q3SXP7 199 aa6.28□□□□□ -1.4
YBX3-212ENST00000542002 C14orf177Q52M58 125 aa6.28□□□□□ -1.4
YBX3-212ENST00000542002 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
YBX3-212ENST00000542002 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 PANO1I0J062 215 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 Q6ZUT4 128 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 C9orf163Q8N9P6 203 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 TIMM21Q9BVV7 248 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 RPS10P5Q9NQ39 176 aa6.27□□□□□ -1.41
YBX3-212ENST00000542002 TRAV9-1A0A075B6T8 112 aa6.26□□□□□ -1.41
YBX3-212ENST00000542002 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
YBX3-212ENST00000542002 HIGD2BQ4VC39 106 aa6.26□□□□□ -1.41
YBX3-212ENST00000542002 LAMTOR2Q9Y2Q5 125 aa6.26□□□□□ -1.41
YBX3-212ENST00000542002 TRAV13-1A0A0B4J241 112 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 APOC3P02656 99 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
YBX3-212ENST00000542002 RHEBQ15382 184 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 SS18Q15532 418 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 SCXQ7RTU7 201 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 Q8N8P6 123 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 LINC00526Q96FQ7 95 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 GNB1LQ9BYB4 327 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 MAP1LC3AQ9H492 121 aa6.25□□□□□ -1.41
YBX3-212ENST00000542002 TGIF2-C20orf24A0A0A6YYL0 155 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 C1orf196B1AJZ1 125 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 EPM2AB3EWF7 344 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 RAB5AP20339 215 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 S100PP25815 95 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 Q5VSD8 79 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 CIRBP-AS1Q8TBR5 109 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 SPANXA1Q9NS26 97 aa6.24□□□□□ -1.41
YBX3-212ENST00000542002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
YBX3-212ENST00000542002 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
YBX3-212ENST00000542002 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
YBX3-212ENST00000542002 MRPS36P82909 103 aaKnown RBP6.23□□□□□ -1.41
YBX3-212ENST00000542002 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
YBX3-212ENST00000542002 SLC7A5P1Q8MH63 180 aa6.23□□□□□ -1.41
YBX3-212ENST00000542002 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
YBX3-212ENST00000542002 PYGO1Q9Y3Y4 419 aa6.23□□□□□ -1.41
YBX3-212ENST00000542002 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
YBX3-212ENST00000542002 SMAGPQ0VAQ4 97 aa6.22□□□□□ -1.41
YBX3-212ENST00000542002 C2orf66Q6UXQ4 117 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms