RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CLPSL2Q6UWE3 100 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 LAMTOR2Q9Y2Q5 125 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 TRAPPC1Q9Y5R8 145 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
LTBR-209ENST00000541102 UBE2L6O14933 153 aa9.4□□□□□ -0.9
LTBR-209ENST00000541102 MT-ND6P03923 174 aa9.4□□□□□ -0.9
LTBR-209ENST00000541102 FGF6P10767 208 aa9.4□□□□□ -0.9
LTBR-209ENST00000541102 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
LTBR-209ENST00000541102 MAP1LC3AQ9H492 121 aa9.4□□□□□ -0.9
LTBR-209ENST00000541102 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.91
LTBR-209ENST00000541102 A0A1B0GUV1 79 aa9.39□□□□□ -0.91
LTBR-209ENST00000541102 COLCA2A8K830 154 aa9.39□□□□□ -0.91
LTBR-209ENST00000541102 IFI27P40305 119 aaPredicted RBP9.39□□□□□ -0.91
LTBR-209ENST00000541102 RPL39P62891 51 aaKnown RBP9.39□□□□□ -0.91
LTBR-209ENST00000541102 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
LTBR-209ENST00000541102 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
LTBR-209ENST00000541102 ATP6V1G1O75348 118 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 CRPP02741 224 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 HAMPP81172 84 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 Q0VG73 95 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
LTBR-209ENST00000541102 Q8N8P6 123 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 PRR34Q9NV39 138 aa9.38□□□□□ -0.91
LTBR-209ENST00000541102 H7C423 109 aa9.37□□□□□ -0.91
LTBR-209ENST00000541102 PKIAP61925 76 aa9.37□□□□□ -0.91
LTBR-209ENST00000541102 AMMECR1LQ6DCA0 310 aa9.37□□□□□ -0.91
LTBR-209ENST00000541102 EPM2AB3EWF7 344 aa9.36□□□□□ -0.91
LTBR-209ENST00000541102 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
LTBR-209ENST00000541102 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
LTBR-209ENST00000541102 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
LTBR-209ENST00000541102 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
LTBR-209ENST00000541102 REG3AQ06141 175 aa9.35□□□□□ -0.91
LTBR-209ENST00000541102 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
LTBR-209ENST00000541102 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
LTBR-209ENST00000541102 MRPL52Q86TS9 123 aaKnown RBP9.35□□□□□ -0.91
LTBR-209ENST00000541102 URB1-AS1Q96HZ7 61 aa9.35□□□□□ -0.91
LTBR-209ENST00000541102 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
LTBR-209ENST00000541102 IGKV3OR2-268A0A0C4DH90 116 aa9.34□□□□□ -0.91
LTBR-209ENST00000541102 TRGC2P03986 189 aa9.34□□□□□ -0.91
LTBR-209ENST00000541102 RAB5AP20339 215 aa9.34□□□□□ -0.91
LTBR-209ENST00000541102 C18orf32Q8TCD1 76 aa9.34□□□□□ -0.91
LTBR-209ENST00000541102 NXT2Q9NPJ8 142 aaKnown RBP9.34□□□□□ -0.91
LTBR-209ENST00000541102 FAM30AQ9NZY2 134 aa9.34□□□□□ -0.91
LTBR-209ENST00000541102 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
LTBR-209ENST00000541102 Q6ZUT4 128 aa9.33□□□□□ -0.92
LTBR-209ENST00000541102 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
LTBR-209ENST00000541102 PRSS3P2Q8NHM4 247 aa9.33□□□□□ -0.92
LTBR-209ENST00000541102 CDC42SE2Q9NRR3 84 aa9.33□□□□□ -0.92
LTBR-209ENST00000541102 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
LTBR-209ENST00000541102 ZNF25P17030 456 aaPredicted RBP9.32□□□□□ -0.92
LTBR-209ENST00000541102 MIAQ16674 131 aa9.32□□□□□ -0.92
LTBR-209ENST00000541102 Q5VSD8 79 aa9.31□□□□□ -0.92
LTBR-209ENST00000541102 C2orf66Q6UXQ4 117 aa9.31□□□□□ -0.92
LTBR-209ENST00000541102 ZNF664Q8N3J9 261 aa9.31□□□□□ -0.92
LTBR-209ENST00000541102 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
LTBR-209ENST00000541102 TIMM21Q9BVV7 248 aa9.31□□□□□ -0.92
LTBR-209ENST00000541102 ZC2HC1BQ5TFG8 222 aa9.3□□□□□ -0.92
LTBR-209ENST00000541102 CSDC2Q9Y534 153 aaKnown RBP9.3□□□□□ -0.92
LTBR-209ENST00000541102 A0A096LNJ9 63 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 S100A1P23297 94 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 C14orf177Q52M58 125 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 ORMDL2Q53FV1 153 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 DGAT2L7PQ6IED9 249 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 SPANXA1Q9NS26 97 aa9.29□□□□□ -0.92
LTBR-209ENST00000541102 IGLV4-3A0A075B6K6 122 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 LINC00959A0A1B0GUT2 108 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 PMCHL1Q16048 86 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 FA2HQ7L5A8 372 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 CYSLTR1Q9Y271 337 aa9.28□□□□□ -0.92
LTBR-209ENST00000541102 IGIPA6NJ69 53 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 FAM229AH3BQW9 127 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 K7EMI3 77 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 CHCHD10Q8WYQ3 142 aaPredicted RBP9.27□□□□□ -0.93
LTBR-209ENST00000541102 TOMM6Q96B49 74 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 PYGO1Q9Y3Y4 419 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 FAT1Q14517 4588 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 DNAH8Q96JB1 4490 aa9.27□□□□□ -0.93
LTBR-209ENST00000541102 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
LTBR-209ENST00000541102 LINC00614P0C842 121 aa9.26□□□□□ -0.93
LTBR-209ENST00000541102 LINC00310P59036 64 aa9.26□□□□□ -0.93
LTBR-209ENST00000541102 MRPS36P82909 103 aaKnown RBP9.26□□□□□ -0.93
LTBR-209ENST00000541102 LINC00173Q6ZV60 143 aa9.26□□□□□ -0.93
LTBR-209ENST00000541102 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 TRAV8-4A0A0B4J246 113 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 CCL25O15444 150 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 PRSS1P07477 247 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 XCL1P47992 114 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 FOXI1Q12951 378 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 AP5S1Q9NUS5 200 aa9.25□□□□□ -0.93
LTBR-209ENST00000541102 Q6ZSA8 131 aa9.24□□□□□ -0.93
LTBR-209ENST00000541102 NUPR1O60356 82 aa9.23□□□□□ -0.93
LTBR-209ENST00000541102 SMAGPQ0VAQ4 97 aa9.23□□□□□ -0.93
LTBR-209ENST00000541102 TMEM141Q96I45 108 aa9.23□□□□□ -0.93
LTBR-209ENST00000541102 SCXQ7RTU7 201 aa9.22□□□□□ -0.93
LTBR-209ENST00000541102 SCGB3A1Q96QR1 104 aa9.22□□□□□ -0.93
LTBR-209ENST00000541102 AMELXQ99217 191 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms