RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TMEM136Q6ZRR5 245 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 OR5A1Q8NGJ0 315 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 TMEM101Q96IK0 257 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 PRELID3AQ96N28 172 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 IMMP2LQ96T52 175 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 SMIM2Q9BVW6 85 aa6.06□□□□□ -1.44
SNHG1-215ENST00000540904 PHOX2AO14813 284 aa6.05□□□□□ -1.44
SNHG1-215ENST00000540904 RPL32P62910 135 aaKnown RBP6.05□□□□□ -1.44
SNHG1-215ENST00000540904 C10orf91Q5T1B1 145 aa6.05□□□□□ -1.44
SNHG1-215ENST00000540904 MRPL52Q86TS9 123 aaKnown RBP6.05□□□□□ -1.44
SNHG1-215ENST00000540904 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 TCAPO15273 167 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 S100PP25815 95 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 LINC01620Q4KN68 170 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 DGAT2L7PQ6IED9 249 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 CLRN3Q8NCR9 226 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 RPS10P5Q9NQ39 176 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 CARHSP1Q9Y2V2 147 aaKnown RBP6.04□□□□□ -1.44
SNHG1-215ENST00000540904 KIAA1109Q2LD37 5005 aa6.04□□□□□ -1.44
SNHG1-215ENST00000540904 LOC389332A0A1B0GUA5 103 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 ATP6V1G1O75348 118 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 XGP55808 180 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 HAMPP81172 84 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 SMAGPQ0VAQ4 97 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 RHEBQ15382 184 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 ZNF664Q8N3J9 261 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 CHCHD10Q8WYQ3 142 aaPredicted RBP6.03□□□□□ -1.44
SNHG1-215ENST00000540904 TMEM18Q96B42 140 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 MAP1LC3AQ9H492 121 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 CDC42SE2Q9NRR3 84 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 LAMTOR2Q9Y2Q5 125 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 UBE2D4Q9Y2X8 147 aa6.03□□□□□ -1.44
SNHG1-215ENST00000540904 TRAV9-1A0A075B6T8 112 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 LINC00959A0A1B0GUT2 108 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 hDV102S1A0JD36 115 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 PRSS1P07477 247 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 RAB5AP20339 215 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 XCL1P47992 114 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 RPL39P62891 51 aaKnown RBP6.02□□□□□ -1.45
SNHG1-215ENST00000540904 RNASE13Q5GAN3 156 aaKnown RBP6.02□□□□□ -1.45
SNHG1-215ENST00000540904 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
SNHG1-215ENST00000540904 CSDC2Q9Y534 153 aaKnown RBP6.02□□□□□ -1.45
SNHG1-215ENST00000540904 DNAH11Q96DT5 4516 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 CCL25O15444 150 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 APOC3P02656 99 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 SS18Q15532 418 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 KIAA1644Q3SXP7 199 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 Q6ZUT4 128 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 FAM30AQ9NZY2 134 aa6.01□□□□□ -1.45
SNHG1-215ENST00000540904 S100A1P23297 94 aa6□□□□□ -1.45
SNHG1-215ENST00000540904 FOXI1Q12951 378 aa6□□□□□ -1.45
SNHG1-215ENST00000540904 CFAP161Q6P656 301 aa6□□□□□ -1.45
SNHG1-215ENST00000540904 Q8N1X5 172 aa6□□□□□ -1.45
SNHG1-215ENST00000540904 SVBPQ8N300 66 aa6□□□□□ -1.45
SNHG1-215ENST00000540904 TIMM21Q9BVV7 248 aa6□□□□□ -1.45
SNHG1-215ENST00000540904 TRAV13-1A0A0B4J241 112 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 PRSS47A8MTI9 375 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 HIGD2BQ4VC39 106 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 Q8N8P6 123 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 C15orf56Q8N910 161 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 OPRPNQ99935 248 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-215ENST00000540904 GNB1LQ9BYB4 327 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 SPANXA1Q9NS26 97 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 AP5S1Q9NUS5 200 aa5.99□□□□□ -1.45
SNHG1-215ENST00000540904 DYNC1H1Q14204 4646 aaKnown RBP5.98□□□□□ -1.45
SNHG1-215ENST00000540904 C1orf196B1AJZ1 125 aa5.98□□□□□ -1.45
SNHG1-215ENST00000540904 SNAPINO95295 136 aa5.98□□□□□ -1.45
SNHG1-215ENST00000540904 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-215ENST00000540904 IFI27P40305 119 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-215ENST00000540904 CD164L2Q6UWJ8 174 aa5.98□□□□□ -1.45
SNHG1-215ENST00000540904 Q6ZSA8 131 aa5.98□□□□□ -1.45
SNHG1-215ENST00000540904 NXT2Q9NPJ8 142 aaKnown RBP5.98□□□□□ -1.45
SNHG1-215ENST00000540904 TGIF2-C20orf24A0A0A6YYL0 155 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 SLPIP03973 132 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
SNHG1-215ENST00000540904 MRPS36P82909 103 aaKnown RBP5.97□□□□□ -1.45
SNHG1-215ENST00000540904 FABP9Q0Z7S8 132 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 COX19Q49B96 90 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 FAM104AQ969W3 186 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 CYSLTR1Q9Y271 337 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 LRP1BQ9NZR2 4599 aa5.97□□□□□ -1.45
SNHG1-215ENST00000540904 HERC2O95714 4834 aa5.96□□□□□ -1.45
SNHG1-215ENST00000540904 GVQW2A0A096LPI5 108 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-215ENST00000540904 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-215ENST00000540904 IGHV1-58A0A0C4DH39 117 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 IFITM10A6NMD0 228 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 MT-ND6P03923 174 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 ORMDL2Q53FV1 153 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 C2orf66Q6UXQ4 117 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 PRSS3P2Q8NHM4 247 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 ALKBH7Q9BT30 221 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-215ENST00000540904 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
SNHG1-215ENST00000540904 PYGO1Q9Y3Y4 419 aa5.96□□□□□ -1.46
SNHG1-215ENST00000540904 IGLV4-3A0A075B6K6 122 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 IGHV3-64A0A075B6Q5 118 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms