RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TEX48A0A1B0GUV7 120 aa17.08■□□□□ 0.32
TTC3-225ENST00000540756 NANOS2P60321 138 aaKnown RBP17.08■□□□□ 0.32
TTC3-225ENST00000540756 AMELXQ99217 191 aa17.08■□□□□ 0.32
TTC3-225ENST00000540756 TMEM243Q9BU79 118 aa17.08■□□□□ 0.32
TTC3-225ENST00000540756 TRBV25-1A0A075B6N4 114 aa17.07■□□□□ 0.32
TTC3-225ENST00000540756 IGKV2D-26A0A0A0MRZ7 120 aa17.07■□□□□ 0.32
TTC3-225ENST00000540756 GAGE6Q13070 117 aa17.04■□□□□ 0.32
TTC3-225ENST00000540756 UQCR10Q9UDW1 63 aa17.04■□□□□ 0.32
TTC3-225ENST00000540756 A0A0J9YXV3 536 aa17.04■□□□□ 0.32
TTC3-225ENST00000540756 DGAT2L7PQ6IED9 249 aa17.04■□□□□ 0.32
TTC3-225ENST00000540756 UBE2L6O14933 153 aa17.03■□□□□ 0.32
TTC3-225ENST00000540756 NMUP48645 174 aa17.03■□□□□ 0.32
TTC3-225ENST00000540756 TTTY13Q9BZ97 58 aa17.03■□□□□ 0.32
TTC3-225ENST00000540756 PCP2Q8IVA1 136 aa17.03■□□□□ 0.32
TTC3-225ENST00000540756 C11orf45Q8TAV5 145 aa17.03■□□□□ 0.32
TTC3-225ENST00000540756 TIMM21Q9BVV7 248 aa17.03■□□□□ 0.32
TTC3-225ENST00000540756 MRPL52Q86TS9 123 aaKnown RBP17.02■□□□□ 0.32
TTC3-225ENST00000540756 CHCHD5Q9BSY4 110 aa17.02■□□□□ 0.32
TTC3-225ENST00000540756 PAPPA-AS1Q5QFB9 102 aa17.01■□□□□ 0.31
TTC3-225ENST00000540756 MRPS36P82909 103 aaKnown RBP17.01■□□□□ 0.31
TTC3-225ENST00000540756 NPSP0C0P6 89 aa17■□□□□ 0.31
TTC3-225ENST00000540756 COX8AP10176 69 aa17■□□□□ 0.31
TTC3-225ENST00000540756 CHAC1Q9BUX1 264 aa17■□□□□ 0.31
TTC3-225ENST00000540756 AMMECR1LQ6DCA0 310 aa16.99■□□□□ 0.31
TTC3-225ENST00000540756 CDC42SE2Q9NRR3 84 aa16.99■□□□□ 0.31
TTC3-225ENST00000540756 CSDC2Q9Y534 153 aaKnown RBP16.99■□□□□ 0.31
TTC3-225ENST00000540756 IGLV4-60A0A075B6I1 120 aa16.98■□□□□ 0.31
TTC3-225ENST00000540756 SLC25A34Q6PIV7 304 aa16.98■□□□□ 0.31
TTC3-225ENST00000540756 NFE4Q86UQ8 179 aa16.98■□□□□ 0.31
TTC3-225ENST00000540756 OR5A1Q8NGJ0 315 aa16.98■□□□□ 0.31
TTC3-225ENST00000540756 MRPL23Q16540 153 aaKnown RBP16.97■□□□□ 0.31
TTC3-225ENST00000540756 TMEM170BQ5T4T1 132 aa16.97■□□□□ 0.31
TTC3-225ENST00000540756 ICOSQ9Y6W8 199 aa16.97■□□□□ 0.31
TTC3-225ENST00000540756 TMEM97Q5BJF2 176 aa16.96■□□□□ 0.31
TTC3-225ENST00000540756 CTAG1AP78358 180 aa16.96■□□□□ 0.3
TTC3-225ENST00000540756 PRKDCP78527 4128 aaKnown RBP16.95■□□□□ 0.3
TTC3-225ENST00000540756 STAB2Q8WWQ8 2551 aa16.95■□□□□ 0.3
TTC3-225ENST00000540756 H7C423 109 aa16.95■□□□□ 0.3
TTC3-225ENST00000540756 UBE2D1P51668 147 aa16.95■□□□□ 0.3
TTC3-225ENST00000540756 HNRNPA3P51991 378 aaKnown RBP16.95■□□□□ 0.3
TTC3-225ENST00000540756 DEFA6Q01524 100 aa16.95■□□□□ 0.3
TTC3-225ENST00000540756 ZNF22P17026 224 aaPredicted RBP16.94■□□□□ 0.3
TTC3-225ENST00000540756 C2orf88Q9BSF0 95 aa16.94■□□□□ 0.3
TTC3-225ENST00000540756 DEFB131BA0A096LNP1 70 aa16.94■□□□□ 0.3
TTC3-225ENST00000540756 Q8N3U1 123 aa16.94■□□□□ 0.3
TTC3-225ENST00000540756 TMEM101Q96IK0 257 aa16.94■□□□□ 0.3
TTC3-225ENST00000540756 TRAV13-1A0A0B4J241 112 aa16.93■□□□□ 0.3
TTC3-225ENST00000540756 TRAV8-6A0A0B4J262 113 aa16.93■□□□□ 0.3
TTC3-225ENST00000540756 BOD1L2Q8IYS8 172 aa16.93■□□□□ 0.3
TTC3-225ENST00000540756 MAPKAPK5-AS1Q8N8E1 139 aa16.93■□□□□ 0.3
TTC3-225ENST00000540756 TMEM262E9PQX1 116 aa16.92■□□□□ 0.3
TTC3-225ENST00000540756 MPV17L2Q567V2 206 aa16.92■□□□□ 0.3
TTC3-225ENST00000540756 COX6A2Q02221 97 aa16.91■□□□□ 0.3
TTC3-225ENST00000540756 MEGF8Q7Z7M0 2845 aa16.91■□□□□ 0.3
TTC3-225ENST00000540756 C2orf91Q6ZV80 131 aa16.91■□□□□ 0.3
TTC3-225ENST00000540756 IGHV3-64A0A075B6Q5 118 aa16.9■□□□□ 0.3
TTC3-225ENST00000540756 IGKV3OR2-268A0A0C4DH90 116 aa16.9■□□□□ 0.3
TTC3-225ENST00000540756 E9PLD3 99 aa16.9■□□□□ 0.3
TTC3-225ENST00000540756 ZNF25P17030 456 aaPredicted RBP16.9■□□□□ 0.3
TTC3-225ENST00000540756 TINCRA0A1B0GVN0 87 aa16.89■□□□□ 0.29
TTC3-225ENST00000540756 LINC00242Q5T6M2 205 aa16.89■□□□□ 0.29
TTC3-225ENST00000540756 TMEM223A0PJW6 202 aa16.89■□□□□ 0.29
TTC3-225ENST00000540756 RBX1P62877 108 aa16.89■□□□□ 0.29
TTC3-225ENST00000540756 SMAGPQ0VAQ4 97 aa16.89■□□□□ 0.29
TTC3-225ENST00000540756 LYPD5Q6UWN5 251 aa16.88■□□□□ 0.29
TTC3-225ENST00000540756 B9D2Q9BPU9 175 aa16.88■□□□□ 0.29
TTC3-225ENST00000540756 TSPEAR-AS2P59090 65 aa16.87■□□□□ 0.29
TTC3-225ENST00000540756 H3BNG1 76 aa16.87■□□□□ 0.29
TTC3-225ENST00000540756 EREGO14944 169 aa16.87■□□□□ 0.29
TTC3-225ENST00000540756 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
TTC3-225ENST00000540756 CDKN2A-AS1Q9UH64 79 aa16.86■□□□□ 0.29
TTC3-225ENST00000540756 SH2D6Q7Z4S9 175 aa16.86■□□□□ 0.29
TTC3-225ENST00000540756 LINC00469Q8N7U9 141 aa16.86■□□□□ 0.29
TTC3-225ENST00000540756 GEMIN7Q9H840 131 aaKnown RBP16.86■□□□□ 0.29
TTC3-225ENST00000540756 MRPS16Q9Y3D3 137 aaKnown RBP16.86■□□□□ 0.29
TTC3-225ENST00000540756 TRAV8-3A0A0A6YYJ7 113 aa16.85■□□□□ 0.29
TTC3-225ENST00000540756 DLEU1O43261 78 aa16.84■□□□□ 0.29
TTC3-225ENST00000540756 HERVK_113P61574 105 aa16.84■□□□□ 0.29
TTC3-225ENST00000540756 LELP1Q5T871 98 aa16.84■□□□□ 0.29
TTC3-225ENST00000540756 A0A1B0GUV1 79 aa16.84■□□□□ 0.29
TTC3-225ENST00000540756 CLPSL2Q6UWE3 100 aa16.84■□□□□ 0.29
TTC3-225ENST00000540756 SPINK8P0C7L1 97 aa16.82■□□□□ 0.28
TTC3-225ENST00000540756 TIRAPP58753 221 aa16.82■□□□□ 0.28
TTC3-225ENST00000540756 KRTAP21-3Q3LHN1 58 aa16.82■□□□□ 0.28
TTC3-225ENST00000540756 FAM19A3Q7Z5A8 133 aa16.82■□□□□ 0.28
TTC3-225ENST00000540756 IGLV5-45A0A087WSX0 123 aa16.8■□□□□ 0.28
TTC3-225ENST00000540756 TRAV10A0A0B4J240 114 aa16.8■□□□□ 0.28
TTC3-225ENST00000540756 BATFQ16520 125 aa16.8■□□□□ 0.28
TTC3-225ENST00000540756 HINT1P49773 126 aaPredicted RBP16.8■□□□□ 0.28
TTC3-225ENST00000540756 ESRGQ1W209 222 aa16.8■□□□□ 0.28
TTC3-225ENST00000540756 MYMXA0A1B0GTQ4 84 aa16.79■□□□□ 0.28
TTC3-225ENST00000540756 HERVK_113P63121 156 aa16.79■□□□□ 0.28
TTC3-225ENST00000540756 LINC00269Q8N2A0 174 aa16.79■□□□□ 0.28
TTC3-225ENST00000540756 ZNF815PA8K554 130 aa16.78■□□□□ 0.28
TTC3-225ENST00000540756 J3QQQ9 107 aa16.78■□□□□ 0.28
TTC3-225ENST00000540756 M0R143 59 aa16.78■□□□□ 0.28
TTC3-225ENST00000540756 IGHV3-30-3P0DP02 117 aa16.78■□□□□ 0.28
TTC3-225ENST00000540756 LEPROTO15243 131 aa16.77■□□□□ 0.28
TTC3-225ENST00000540756 LINC00959A0A1B0GUT2 108 aa16.77■□□□□ 0.27
TTC3-225ENST00000540756 WFDC10BQ8IUB3 73 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms