RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
SCNN1A-215ENST00000540037 USP9XQ93008 2570 aaPredicted RBP10.05□□□□□ -0.8
SCNN1A-215ENST00000540037 IGHV3OR16-12A0A075B7B8 117 aa10.05□□□□□ -0.8
SCNN1A-215ENST00000540037 LINC00694P0DN24 101 aa10.05□□□□□ -0.8
SCNN1A-215ENST00000540037 SHISA2Q6UWI4 295 aa10.05□□□□□ -0.8
SCNN1A-215ENST00000540037 SMCR5Q8TEV8 140 aa10.05□□□□□ -0.8
SCNN1A-215ENST00000540037 NDUFA1O15239 70 aa10.04□□□□□ -0.8
SCNN1A-215ENST00000540037 YAE1D1Q9NRH1 226 aa10.04□□□□□ -0.8
SCNN1A-215ENST00000540037 CHD6Q8TD26 2715 aa10.04□□□□□ -0.8
SCNN1A-215ENST00000540037 DEFB121Q5J5C9 76 aa10.04□□□□□ -0.8
SCNN1A-215ENST00000540037 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
SCNN1A-215ENST00000540037 DGAT2L7PQ6IED9 249 aa10.03□□□□□ -0.8
SCNN1A-215ENST00000540037 TRAV13-1A0A0B4J241 112 aa10.02□□□□□ -0.8
SCNN1A-215ENST00000540037 UCNP55089 124 aa10.02□□□□□ -0.8
SCNN1A-215ENST00000540037 HERV-K104P63124 156 aa10.02□□□□□ -0.8
SCNN1A-215ENST00000540037 LINC00242Q5T6M2 205 aa10.02□□□□□ -0.8
SCNN1A-215ENST00000540037 LINC01587Q99440 93 aa10.02□□□□□ -0.8
SCNN1A-215ENST00000540037 WNK1Q9H4A3 2382 aa10.02□□□□□ -0.81
SCNN1A-215ENST00000540037 FAM236AA0A1B0GUQ0 79 aa10.02□□□□□ -0.81
SCNN1A-215ENST00000540037 FAM236BA0A1B0GV22 79 aa10.02□□□□□ -0.81
SCNN1A-215ENST00000540037 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
SCNN1A-215ENST00000540037 FAM218AQ96MZ4 157 aa10.01□□□□□ -0.81
SCNN1A-215ENST00000540037 PIK3CD-AS1Q5SR53 167 aa10.01□□□□□ -0.81
SCNN1A-215ENST00000540037 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
SCNN1A-215ENST00000540037 NBPF19A0A087WUL8 3843 aa10.01□□□□□ -0.81
SCNN1A-215ENST00000540037 TIMM17BO60830 172 aa10.01□□□□□ -0.81
SCNN1A-215ENST00000540037 IGHV3-53P01767 116 aa10□□□□□ -0.81
SCNN1A-215ENST00000540037 ZNF415Q09FC8 603 aa10□□□□□ -0.81
SCNN1A-215ENST00000540037 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
SCNN1A-215ENST00000540037 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
SCNN1A-215ENST00000540037 RNF152Q8N8N0 203 aa10□□□□□ -0.81
SCNN1A-215ENST00000540037 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
SCNN1A-215ENST00000540037 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
SCNN1A-215ENST00000540037 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 COX7A2LO14548 114 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 C22orf24Q9Y442 160 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 TMEM89A2RUT3 159 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 SMIM1B2RUZ4 78 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 TIRAPP58753 221 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 TEX15Q9BXT5 2789 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 MRPL23Q16540 153 aaKnown RBP9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 Q9HAA7 133 aa9.99□□□□□ -0.81
SCNN1A-215ENST00000540037 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
SCNN1A-215ENST00000540037 B4DSR2 109 aa9.98□□□□□ -0.81
SCNN1A-215ENST00000540037 PRIMA1Q86XR5 153 aa9.98□□□□□ -0.81
SCNN1A-215ENST00000540037 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
SCNN1A-215ENST00000540037 ANKRD17O75179 2603 aaKnown RBP9.98□□□□□ -0.81
SCNN1A-215ENST00000540037 JMJD1CQ15652 2540 aa9.98□□□□□ -0.81
SCNN1A-215ENST00000540037 NF1P21359 2839 aa9.97□□□□□ -0.81
SCNN1A-215ENST00000540037 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
SCNN1A-215ENST00000540037 UBE2E2Q96LR5 201 aa9.97□□□□□ -0.81
SCNN1A-215ENST00000540037 TLN2Q9Y4G6 2542 aa9.96□□□□□ -0.81
SCNN1A-215ENST00000540037 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.81
SCNN1A-215ENST00000540037 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.81
SCNN1A-215ENST00000540037 Q96MF0 132 aa9.96□□□□□ -0.82
SCNN1A-215ENST00000540037 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
SCNN1A-215ENST00000540037 EPG5Q9HCE0 2579 aa9.96□□□□□ -0.82
SCNN1A-215ENST00000540037 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
SCNN1A-215ENST00000540037 SETD2Q9BYW2 2564 aaPredicted RBP9.95□□□□□ -0.82
SCNN1A-215ENST00000540037 PKD1L2Q7Z442 2459 aa9.95□□□□□ -0.82
SCNN1A-215ENST00000540037 HERVK_113P63121 156 aa9.95□□□□□ -0.82
SCNN1A-215ENST00000540037 FAM110AQ9BQ89 295 aa9.95□□□□□ -0.82
SCNN1A-215ENST00000540037 MYO18BQ8IUG5 2567 aa9.95□□□□□ -0.82
SCNN1A-215ENST00000540037 TRGV1A0A0A0MS02 117 aa9.94□□□□□ -0.82
SCNN1A-215ENST00000540037 KHDC1LQ5JSQ8 128 aa9.94□□□□□ -0.82
SCNN1A-215ENST00000540037 RS1O15537 224 aa9.94□□□□□ -0.82
SCNN1A-215ENST00000540037 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
SCNN1A-215ENST00000540037 DOPEY1Q5JWR5 2465 aa9.94□□□□□ -0.82
SCNN1A-215ENST00000540037 ZNF469Q96JG9 3925 aaPredicted RBP9.93□□□□□ -0.82
SCNN1A-215ENST00000540037 A8MTW9 85 aa9.93□□□□□ -0.82
SCNN1A-215ENST00000540037 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
SCNN1A-215ENST00000540037 F5H768 121 aa9.93□□□□□ -0.82
SCNN1A-215ENST00000540037 GAGE2AQ6NT46 116 aa9.92□□□□□ -0.82
SCNN1A-215ENST00000540037 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
SCNN1A-215ENST00000540037 Q6ZTI0 123 aa9.92□□□□□ -0.82
SCNN1A-215ENST00000540037 VPREB3Q9UKI3 123 aa9.92□□□□□ -0.82
SCNN1A-215ENST00000540037 INSP01308 110 aa9.91□□□□□ -0.82
SCNN1A-215ENST00000540037 SETXQ7Z333 2677 aaKnown RBP9.91□□□□□ -0.82
SCNN1A-215ENST00000540037 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
SCNN1A-215ENST00000540037 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
SCNN1A-215ENST00000540037 SONP18583 2426 aaKnown RBP9.9□□□□□ -0.82
SCNN1A-215ENST00000540037 FAM208BQ5VWN6 2430 aa9.9□□□□□ -0.82
SCNN1A-215ENST00000540037 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.82
SCNN1A-215ENST00000540037 PTPN13Q12923 2485 aa9.9□□□□□ -0.82
SCNN1A-215ENST00000540037 ACACBO00763 2458 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 TRACP01848 142 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 ACYP1P07311 99 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 LINC00643Q86TS7 51 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 C1orf158Q8N1D5 194 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 ABCA12Q86UK0 2595 aa9.9□□□□□ -0.83
SCNN1A-215ENST00000540037 DYNLRB2Q8TF09 96 aa9.89□□□□□ -0.83
SCNN1A-215ENST00000540037 A0A087WYN8 130 aa9.89□□□□□ -0.83
SCNN1A-215ENST00000540037 PPDPFQ9H3Y8 114 aa9.89□□□□□ -0.83
SCNN1A-215ENST00000540037 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 LOC100131303A0A0U1RQF7 123 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 MIR7-3HGQ8N6C7 128 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 C9orf153Q5TBE3 101 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms