RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 DPH3P1Q9H4G8 78 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 MDFICQ9P1T7 246 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 LOC107984156A0A0G2JMH3 177 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 MT-ATP8P03928 68 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 SMCPP49901 116 aaPredicted RBP6.41□□□□□ -1.38
DDB1-213ENST00000539332 XGP55808 180 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 LINC00315P59091 139 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 KRTAP10-11P60412 298 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 ARL17AQ8IVW1 177 aa6.41□□□□□ -1.38
DDB1-213ENST00000539332 SPRY2O43597 315 aa6.4□□□□□ -1.38
DDB1-213ENST00000539332 GAS8-AS1O95177 125 aa6.4□□□□□ -1.38
DDB1-213ENST00000539332 GATA1P15976 413 aaPredicted RBP6.4□□□□□ -1.38
DDB1-213ENST00000539332 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
DDB1-213ENST00000539332 RPL32P62910 135 aaKnown RBP6.4□□□□□ -1.38
DDB1-213ENST00000539332 NFE4Q86UQ8 179 aa6.4□□□□□ -1.38
DDB1-213ENST00000539332 C1orf158Q8N1D5 194 aa6.4□□□□□ -1.38
DDB1-213ENST00000539332 C11orf72Q8NBR9 251 aa6.4□□□□□ -1.38
DDB1-213ENST00000539332 SCGB1C2P0DMR2 95 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 ZNF415Q09FC8 603 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 Q6Q795 121 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 LINC00528Q8N1L1 170 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 IL17DQ8TAD2 202 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 C10orf126Q8N4M7 172 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 C14orf178Q8N769 122 aaPredicted RBP6.39□□□□□ -1.39
DDB1-213ENST00000539332 BAALCQ8WXS3 180 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 TMEM141Q96I45 108 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 DNAH3Q8TD57 4116 aa6.39□□□□□ -1.39
DDB1-213ENST00000539332 RPL35AP18077 110 aaKnown RBP6.38□□□□□ -1.39
DDB1-213ENST00000539332 C2orf66Q6UXQ4 117 aa6.38□□□□□ -1.39
DDB1-213ENST00000539332 CSNK1G2-AS1Q8NCQ2 148 aa6.38□□□□□ -1.39
DDB1-213ENST00000539332 RASL10AQ92737 203 aa6.38□□□□□ -1.39
DDB1-213ENST00000539332 RNF183Q96D59 192 aa6.38□□□□□ -1.39
DDB1-213ENST00000539332 EDA2RQ9HAV5 297 aa6.38□□□□□ -1.39
DDB1-213ENST00000539332 TRAV26-2A0A0B4J265 109 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 M0R2P5 195 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 RHODO00212 210 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 SNCGO76070 127 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 CRYGDP07320 174 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 P0DMU3 169 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 LINC01587Q99440 93 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 JPT2Q9H910 190 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 PRO1854Q9UHT4 67 aa6.37□□□□□ -1.39
DDB1-213ENST00000539332 A0A0J9YY99 117 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 TCL1BO95988 128 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 ZNF876PQ49A33 203 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 GAGE2EQ4V326 116 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 ANKRD29Q8N6D5 301 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 SLC25A29Q8N8R3 303 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 GAGE2DQ9UEU5 116 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 C11orf86A6NJI1 115 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 PRM2P04554 102 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 PMVKQ15126 192 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 LINC01620Q4KN68 170 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
DDB1-213ENST00000539332 TIMM17AQ99595 171 aa6.36□□□□□ -1.39
DDB1-213ENST00000539332 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.35□□□□□ -1.39
DDB1-213ENST00000539332 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 GAGE12JA6NER3 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 SLC25A20O43772 301 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 GAGE7O76087 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 IGHV3-30P01768 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 MGPP08493 103 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 GAGE12FP0CL80 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 GAGE12GP0CL81 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 GAGE12IP0CL82 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 IGHV3-30-5P0DP03 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 IGHV4-30-4P0DP06 118 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 GAGE4Q13068 117 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 KPRPQ5T749 579 aaPredicted RBP6.35□□□□□ -1.39
DDB1-213ENST00000539332 SUMO4Q6EEV6 95 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 TENM3Q9P273 2699 aa6.35□□□□□ -1.39
DDB1-213ENST00000539332 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
DDB1-213ENST00000539332 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.39
DDB1-213ENST00000539332 ATXN8Q156A1 80 aa6.34□□□□□ -1.39
DDB1-213ENST00000539332 TTC32Q5I0X7 151 aa6.34□□□□□ -1.39
DDB1-213ENST00000539332 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
DDB1-213ENST00000539332 PLEKHB2Q96CS7 222 aa6.34□□□□□ -1.39
DDB1-213ENST00000539332 RPL39LQ96EH5 51 aaKnown RBP6.34□□□□□ -1.39
DDB1-213ENST00000539332 CFC1BP0CG36 223 aa6.34□□□□□ -1.4
DDB1-213ENST00000539332 CFC1P0CG37 223 aa6.34□□□□□ -1.4
DDB1-213ENST00000539332 IFITM1P13164 125 aa6.34□□□□□ -1.4
DDB1-213ENST00000539332 HTN1P15515 57 aa6.34□□□□□ -1.4
DDB1-213ENST00000539332 LGALS3P17931 250 aaKnown RBP6.34□□□□□ -1.4
DDB1-213ENST00000539332 POLR2KP53803 58 aaKnown RBP6.34□□□□□ -1.4
DDB1-213ENST00000539332 NDUFV3P56181 108 aaKnown RBP6.34□□□□□ -1.4
DDB1-213ENST00000539332 DAZ2Q13117 558 aaKnown RBP6.34□□□□□ -1.4
DDB1-213ENST00000539332 KIR2DL5BQ8NHK3 375 aa6.34□□□□□ -1.4
DDB1-213ENST00000539332 C16orf74Q96GX8 76 aa6.34□□□□□ -1.4
DDB1-213ENST00000539332 M0QY20 66 aa6.33□□□□□ -1.4
DDB1-213ENST00000539332 APOC4P55056 127 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms