RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SPANXA1Q9NS26 97 aa7.38□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IGKV3OR2-268A0A0C4DH90 116 aa7.37□□□□□ -1.23
TNFRSF1A-211ENST00000538363 SCGB1D1O95968 90 aa7.37□□□□□ -1.23
TNFRSF1A-211ENST00000538363 ZNF25P17030 456 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TIRAPP58753 221 aa7.37□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IGHV3-30P01768 117 aa7.36□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IGHV3-33P01772 117 aa7.36□□□□□ -1.23
TNFRSF1A-211ENST00000538363 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IGHV3-30-3P0DP02 117 aa7.36□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IGHV3-30-5P0DP03 117 aa7.36□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
TNFRSF1A-211ENST00000538363 PMVKQ15126 192 aa7.35□□□□□ -1.23
TNFRSF1A-211ENST00000538363 ZNF664Q8N3J9 261 aa7.35□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TIMM21Q9BVV7 248 aa7.35□□□□□ -1.23
TNFRSF1A-211ENST00000538363 APLNQ9ULZ1 77 aa7.35□□□□□ -1.23
TNFRSF1A-211ENST00000538363 UBE2D4Q9Y2X8 147 aa7.35□□□□□ -1.23
TNFRSF1A-211ENST00000538363 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TRAV9-2A0A087WT02 112 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 A0A096LNJ9 63 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 TMEM238LA0A1B0GVL6 79 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IFITM10A6NMD0 228 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 CRPP02741 224 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 C3orf79P0CE67 100 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 RBX1P62877 108 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 LINC00173Q6ZV60 143 aa7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 OPRPNQ99935 248 aaPredicted RBP7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 CHTOPQ9Y3Y2 248 aaKnown RBP7.34□□□□□ -1.23
TNFRSF1A-211ENST00000538363 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 C3orf84H3BNL1 204 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 SYS1-DBNDD2H3BUS1 97 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 SIVA1O15304 175 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 SS18Q15532 418 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 Q8N3U1 123 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 Q8N976 141 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 BAALCQ8WXS3 180 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 LINC00588Q9Y4M8 146 aa7.33□□□□□ -1.24
TNFRSF1A-211ENST00000538363 IGLV4-3A0A075B6K6 122 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 NPSP0C0P6 89 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 MRPS36P82909 103 aaKnown RBP7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 MPV17L2Q567V2 206 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 Q6ZUT4 128 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 GEMIN7Q9H840 131 aaKnown RBP7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 CSDC2Q9Y534 153 aaKnown RBP7.32□□□□□ -1.24
TNFRSF1A-211ENST00000538363 PRSS29PA6NIE9 313 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 HSBP1L1C9JCN9 74 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 SEC11AP67812 179 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 CLPSL2Q6UWE3 100 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 LINC00269Q8N2A0 174 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 Q9H8V8 135 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 CDC42SE2Q9NRR3 84 aa7.31□□□□□ -1.24
TNFRSF1A-211ENST00000538363 IGLV4-60A0A075B6I1 120 aa7.3□□□□□ -1.24
TNFRSF1A-211ENST00000538363 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
TNFRSF1A-211ENST00000538363 ZC2HC1BQ5TFG8 222 aa7.3□□□□□ -1.24
TNFRSF1A-211ENST00000538363 UBE2WQ96B02 151 aa7.3□□□□□ -1.24
TNFRSF1A-211ENST00000538363 PMCHL2Q9BQD1 86 aa7.3□□□□□ -1.24
TNFRSF1A-211ENST00000538363 LOC105371267A0A1B0GV96 52 aa7.29□□□□□ -1.24
TNFRSF1A-211ENST00000538363 DPM2O94777 84 aa7.29□□□□□ -1.24
TNFRSF1A-211ENST00000538363 REG3AQ06141 175 aa7.29□□□□□ -1.24
TNFRSF1A-211ENST00000538363 LGALS9CQ6DKI2 356 aa7.29□□□□□ -1.24
TNFRSF1A-211ENST00000538363 C10orf126Q8N4M7 172 aa7.29□□□□□ -1.24
TNFRSF1A-211ENST00000538363 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 F8VRH5 84 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 LY6G6CO95867 125 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 IGKCP01834 107 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 PLNP26678 52 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 S100A12P80511 92 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 LINC01556Q5JQF7 62 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 TMEM170BQ5T4T1 132 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 RMI2Q96E14 147 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 AMELXQ99217 191 aa7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 MRPL35Q9NZE8 188 aaKnown RBP7.28□□□□□ -1.24
TNFRSF1A-211ENST00000538363 H3BRM9 83 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 HERVK_113P61574 105 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 CASC10Q5T4H9 136 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 SPATA12Q7Z6I5 190 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 ATOH7Q8N100 152 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 UPK3BQ9BT76 320 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 Q9HAA7 133 aa7.27□□□□□ -1.25
TNFRSF1A-211ENST00000538363 IGLV10-54A0A075B6I4 117 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 TRAV8-3A0A0A6YYJ7 113 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 LINC00959A0A1B0GUT2 108 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 CCL25O15444 150 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 DNAH10OSP0CZ25 163 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 XCL1P47992 114 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 HERVK_113P63121 156 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 ODF1Q14990 250 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 XP32Q5T750 250 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 LINC01545Q5VT33 79 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms