RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 TSHBP01222 138 aa11.66□□□□□ -0.54
CTSB-233ENST00000534636 STPG4Q8N801 248 aa11.66□□□□□ -0.54
CTSB-233ENST00000534636 LYPD6BQ8NI32 183 aa11.66□□□□□ -0.54
CTSB-233ENST00000534636 UBR4Q5T4S7 5183 aa11.66□□□□□ -0.54
CTSB-233ENST00000534636 LINC00959A0A1B0GUT2 108 aa11.65□□□□□ -0.54
CTSB-233ENST00000534636 C7orf77A4D0Y5 90 aa11.65□□□□□ -0.54
CTSB-233ENST00000534636 FAM231BA6NCW3 169 aa11.65□□□□□ -0.54
CTSB-233ENST00000534636 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
CTSB-233ENST00000534636 ZNF727A8MUV8 499 aa11.64□□□□□ -0.55
CTSB-233ENST00000534636 MT1HL1P0DM35 61 aa11.64□□□□□ -0.55
CTSB-233ENST00000534636 ESDP10768 282 aa11.64□□□□□ -0.55
CTSB-233ENST00000534636 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
CTSB-233ENST00000534636 A0A096LNI7 61 aa11.63□□□□□ -0.55
CTSB-233ENST00000534636 ZNF561-AS1K7EIQ3 104 aa11.63□□□□□ -0.55
CTSB-233ENST00000534636 FCER1GP30273 86 aa11.63□□□□□ -0.55
CTSB-233ENST00000534636 SMAGPQ0VAQ4 97 aa11.63□□□□□ -0.55
CTSB-233ENST00000534636 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
CTSB-233ENST00000534636 OSTCQ9NRP0 149 aa11.63□□□□□ -0.55
CTSB-233ENST00000534636 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 GAS8-AS1O95177 125 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 PPP1R17O96001 155 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
CTSB-233ENST00000534636 RIGQ13278 110 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 ZNF664Q8N3J9 261 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
CTSB-233ENST00000534636 RAB4AP20338 218 aa11.61□□□□□ -0.55
CTSB-233ENST00000534636 POLR2KP53803 58 aaKnown RBP11.61□□□□□ -0.55
CTSB-233ENST00000534636 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
CTSB-233ENST00000534636 VCYO14598 125 aa11.6□□□□□ -0.55
CTSB-233ENST00000534636 MALP21145 153 aa11.6□□□□□ -0.55
CTSB-233ENST00000534636 LINC00526Q96FQ7 95 aa11.6□□□□□ -0.55
CTSB-233ENST00000534636 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
CTSB-233ENST00000534636 SYCNQ0VAF6 134 aa11.59□□□□□ -0.55
CTSB-233ENST00000534636 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
CTSB-233ENST00000534636 CAMPP49913 170 aa11.58□□□□□ -0.56
CTSB-233ENST00000534636 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
CTSB-233ENST00000534636 PPP1R2P9O14990 202 aa11.57□□□□□ -0.56
CTSB-233ENST00000534636 SRP19P09132 144 aaKnown RBP11.57□□□□□ -0.56
CTSB-233ENST00000534636 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
CTSB-233ENST00000534636 NUP35Q8NFH5 326 aa11.57□□□□□ -0.56
CTSB-233ENST00000534636 NAT8BQ9UHF3 227 aa11.57□□□□□ -0.56
CTSB-233ENST00000534636 V9GYV3 84 aa11.57□□□□□ -0.56
CTSB-233ENST00000534636 TNXBP22105 4242 aa11.57□□□□□ -0.56
CTSB-233ENST00000534636 COX7A2LO14548 114 aa11.56□□□□□ -0.56
CTSB-233ENST00000534636 TMEM18Q96B42 140 aa11.56□□□□□ -0.56
CTSB-233ENST00000534636 CSDC2Q9Y534 153 aaKnown RBP11.56□□□□□ -0.56
CTSB-233ENST00000534636 FAM74A3Q4VXF1 159 aa11.55□□□□□ -0.56
CTSB-233ENST00000534636 LOC107984640A0A0U1RRK4 108 aa11.54□□□□□ -0.56
CTSB-233ENST00000534636 TMEM241Q24JQ0 296 aa11.54□□□□□ -0.56
CTSB-233ENST00000534636 REG3GQ6UW15 175 aa11.54□□□□□ -0.56
CTSB-233ENST00000534636 UBE2D4Q9Y2X8 147 aa11.54□□□□□ -0.56
CTSB-233ENST00000534636 IGLV4-69A0A075B6H9 119 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 APOMO95445 188 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 GAGE2BQ13066 116 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 ADIRFQ15847 76 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
CTSB-233ENST00000534636 SPINK6Q6UWN8 80 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 Q6ZRP5 223 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 NRACQ8N912 160 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 LINC01600Q96MT4 127 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 CAMK2N2Q96S95 79 aa11.53□□□□□ -0.56
CTSB-233ENST00000534636 TCAPO15273 167 aa11.51□□□□□ -0.57
CTSB-233ENST00000534636 RPL23P62829 140 aaKnown RBP11.51□□□□□ -0.57
CTSB-233ENST00000534636 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
CTSB-233ENST00000534636 FAM104BQ5XKR9 115 aa11.51□□□□□ -0.57
CTSB-233ENST00000534636 Q6ZUT4 128 aa11.51□□□□□ -0.57
CTSB-233ENST00000534636 A0A1B0GW15 77 aa11.5□□□□□ -0.57
CTSB-233ENST00000534636 LINC00862A6NCI5 91 aa11.5□□□□□ -0.57
CTSB-233ENST00000534636 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
CTSB-233ENST00000534636 NAT8Q9UHE5 227 aa11.5□□□□□ -0.57
CTSB-233ENST00000534636 CKS2P33552 79 aa11.49□□□□□ -0.57
CTSB-233ENST00000534636 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
CTSB-233ENST00000534636 TIMM21Q9BVV7 248 aa11.49□□□□□ -0.57
CTSB-233ENST00000534636 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
CTSB-233ENST00000534636 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
CTSB-233ENST00000534636 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
CTSB-233ENST00000534636 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
CTSB-233ENST00000534636 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
CTSB-233ENST00000534636 S100A8P05109 93 aa11.47□□□□□ -0.57
CTSB-233ENST00000534636 F8W036 122 aa11.46□□□□□ -0.57
CTSB-233ENST00000534636 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
CTSB-233ENST00000534636 PEA15Q15121 130 aa11.46□□□□□ -0.57
CTSB-233ENST00000534636 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
CTSB-233ENST00000534636 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
CTSB-233ENST00000534636 TNFRSF6BO95407 300 aa11.45□□□□□ -0.58
CTSB-233ENST00000534636 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
CTSB-233ENST00000534636 LRP2P98164 4655 aa11.45□□□□□ -0.58
CTSB-233ENST00000534636 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
CTSB-233ENST00000534636 HBBP68871 147 aa11.44□□□□□ -0.58
CTSB-233ENST00000534636 SPANXA1Q9NS26 97 aa11.44□□□□□ -0.58
CTSB-233ENST00000534636 D6R8Y8 96 aa11.43□□□□□ -0.58
CTSB-233ENST00000534636 MT-ND6P03923 174 aa11.43□□□□□ -0.58
CTSB-233ENST00000534636 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
CTSB-233ENST00000534636 C9orf116Q5BN46 136 aaPredicted RBP11.43□□□□□ -0.58
CTSB-233ENST00000534636 MRPL54Q6P161 138 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms