RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 NAT8BQ9UHF3 227 aa8.55□□□□□ -1.04
CAPN1-228ENST00000534373 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
CAPN1-228ENST00000534373 GVQW2A0A096LPI5 108 aaPredicted RBP8.54□□□□□ -1.04
CAPN1-228ENST00000534373 VCYO14598 125 aa8.54□□□□□ -1.04
CAPN1-228ENST00000534373 GAS8-AS1O95177 125 aa8.54□□□□□ -1.04
CAPN1-228ENST00000534373 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
CAPN1-228ENST00000534373 IFITM2Q01629 132 aa8.54□□□□□ -1.04
CAPN1-228ENST00000534373 FOXI1Q12951 378 aa8.54□□□□□ -1.04
CAPN1-228ENST00000534373 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
CAPN1-228ENST00000534373 LINC00959A0A1B0GUT2 108 aa8.53□□□□□ -1.04
CAPN1-228ENST00000534373 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
CAPN1-228ENST00000534373 CLLU1Q5K131 121 aa8.53□□□□□ -1.04
CAPN1-228ENST00000534373 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
CAPN1-228ENST00000534373 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
CAPN1-228ENST00000534373 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
CAPN1-228ENST00000534373 A0A087WYN8 130 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 A0A1B0GW15 77 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 C7orf77A4D0Y5 90 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 CCL25O15444 150 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 SS18Q15532 418 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 SERTAD4-AS1Q5TG53 156 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
CAPN1-228ENST00000534373 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
CAPN1-228ENST00000534373 FAT3Q8TDW7 4589 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 IGHV1-58A0A0C4DH39 117 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 PPP1R2P9O14990 202 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 SUMO2P61956 95 aaKnown RBP8.51□□□□□ -1.05
CAPN1-228ENST00000534373 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 KIR2DL4Q99706 377 aa8.51□□□□□ -1.05
CAPN1-228ENST00000534373 FCER1GP30273 86 aa8.5□□□□□ -1.05
CAPN1-228ENST00000534373 XCL1P47992 114 aa8.5□□□□□ -1.05
CAPN1-228ENST00000534373 COX6A2Q02221 97 aa8.5□□□□□ -1.05
CAPN1-228ENST00000534373 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
CAPN1-228ENST00000534373 CD164L2Q6UWJ8 174 aa8.5□□□□□ -1.05
CAPN1-228ENST00000534373 NRACQ8N912 160 aa8.5□□□□□ -1.05
CAPN1-228ENST00000534373 C1orf196B1AJZ1 125 aa8.49□□□□□ -1.05
CAPN1-228ENST00000534373 CHTF8P0CG12 524 aa8.49□□□□□ -1.05
CAPN1-228ENST00000534373 Q6ZRU5 148 aa8.49□□□□□ -1.05
CAPN1-228ENST00000534373 TMEM18Q96B42 140 aa8.49□□□□□ -1.05
CAPN1-228ENST00000534373 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
CAPN1-228ENST00000534373 LINC00474Q9P2X8 69 aa8.49□□□□□ -1.05
CAPN1-228ENST00000534373 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
CAPN1-228ENST00000534373 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
CAPN1-228ENST00000534373 TCAPO15273 167 aa8.48□□□□□ -1.05
CAPN1-228ENST00000534373 HNRNPA3P51991 378 aaKnown RBP8.48□□□□□ -1.05
CAPN1-228ENST00000534373 RPL32P62910 135 aaKnown RBP8.48□□□□□ -1.05
CAPN1-228ENST00000534373 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
CAPN1-228ENST00000534373 C7orf33Q8WU49 177 aa8.48□□□□□ -1.05
CAPN1-228ENST00000534373 S100A8P05109 93 aa8.47□□□□□ -1.05
CAPN1-228ENST00000534373 MRPL51Q4U2R6 128 aaKnown RBP8.47□□□□□ -1.05
CAPN1-228ENST00000534373 TIMM21Q9BVV7 248 aa8.47□□□□□ -1.05
CAPN1-228ENST00000534373 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
CAPN1-228ENST00000534373 F8W036 122 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 CKS2P33552 79 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 CAMPP49913 170 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 MAJINQ3KP22 176 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 COMMD7Q86VX2 200 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 PKHD1L1Q86WI1 4243 aa8.46□□□□□ -1.06
CAPN1-228ENST00000534373 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
CAPN1-228ENST00000534373 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 PHOX2AO14813 284 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 PPBPP02775 128 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 MALP21145 153 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 HBBP68871 147 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 STPG4Q8N801 248 aa8.44□□□□□ -1.06
CAPN1-228ENST00000534373 A0A096LNI7 61 aa8.43□□□□□ -1.06
CAPN1-228ENST00000534373 COX7A2LO14548 114 aa8.43□□□□□ -1.06
CAPN1-228ENST00000534373 TNFRSF6BO95407 300 aa8.43□□□□□ -1.06
CAPN1-228ENST00000534373 PNRC1Q12796 327 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-228ENST00000534373 UQCC3Q6UW78 93 aa8.43□□□□□ -1.06
CAPN1-228ENST00000534373 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
CAPN1-228ENST00000534373 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
CAPN1-228ENST00000534373 ATP5L2Q7Z4Y8 100 aa8.42□□□□□ -1.06
CAPN1-228ENST00000534373 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 TMEM218A2RU14 115 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 D6R8Y8 96 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 APOMO95445 188 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 MT-ND4LP03901 98 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 C2orf48Q96LS8 159 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 SMIM2Q9BVW6 85 aa8.41□□□□□ -1.06
CAPN1-228ENST00000534373 IGLV4-69A0A075B6H9 119 aa8.4□□□□□ -1.06
CAPN1-228ENST00000534373 Q6ZUT4 128 aa8.4□□□□□ -1.06
CAPN1-228ENST00000534373 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.06
CAPN1-228ENST00000534373 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.06
CAPN1-228ENST00000534373 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
CAPN1-228ENST00000534373 F8WDY8 70 aa8.39□□□□□ -1.07
CAPN1-228ENST00000534373 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
CAPN1-228ENST00000534373 RNASE13Q5GAN3 156 aaKnown RBP8.39□□□□□ -1.07
CAPN1-228ENST00000534373 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
CAPN1-228ENST00000534373 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
CAPN1-228ENST00000534373 NPYP01303 97 aa8.38□□□□□ -1.07
CAPN1-228ENST00000534373 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms