RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	USP9X	Q93008	2570 aa	Predicted RBP	3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	TMEM262	E9PQX1	116 aa		3.13	□□□□□ -1.91
CTSC-208	ENST00000533897		F5H697	171 aa		3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	ATP5J2	P56134	94 aa		3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	LINC00308	Q8TCZ7	52 aa		3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	NTN5	Q8WTR8	489 aa	Predicted RBP	3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	APC	P25054	2843 aa		3.13	□□□□□ -1.91
CTSC-208	ENST00000533897	IGKV3-20	P01619	116 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	RNASE13	Q5GAN3	156 aa	Known RBP	3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	CACNA1A	O00555	2505 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	NDUFV3	P56181	108 aa	Known RBP	3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	HIST1H4A	P62805	103 aa	Known RBP	3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	FAM218A	Q96MZ4	157 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	CDC42SE2	Q9NRR3	84 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	TRRAP	Q9Y4A5	3859 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	IGKV2-28	A0A075B6P5	120 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	IGKV2D-28	P01615	120 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	ZNF415	Q09FC8	603 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	CLEC2B	Q92478	149 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	DUX5	Q96PT3	197 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	IGHV3-73	A0A0B4J1V6	119 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	NDUFA7	O95182	113 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	DEFB131A	P59861	70 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	DEFB136	Q30KP8	78 aa		3.12	□□□□□ -1.91
CTSC-208	ENST00000533897	SCGB1C2	P0DMR2	95 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	COL6A6	A6NMZ7	2263 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	TENM4	Q6N022	2769 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	TPR	P12270	2363 aa	Known RBP	3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	LINC00612	Q8N6U2	182 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	TRBV10-1	A0A0K0K1A3	114 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	COX7A2L	O14548	114 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	DAZ2	Q13117	558 aa	Known RBP	3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	SS18	Q15532	418 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	FAM222A	Q5U5X8	452 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	C2orf82	Q6UX34	121 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	UBE2W	Q96B02	151 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	OVOL2	Q9BRP0	275 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	CHD6	Q8TD26	2715 aa		3.11	□□□□□ -1.91
CTSC-208	ENST00000533897	KRTAP1-1	Q07627	177 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	PKD1L2	Q7Z442	2459 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	TRAV8-4	A0A0B4J246	113 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	TRAV25	A0A0B4J276	109 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	LY6G6D	O95868	133 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	C5orf38	Q86SI9	138 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	LINC00167	Q96N53	147 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	FAM110A	Q9BQ89	295 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	SPTAN1	Q13813	2472 aa	Known RBP	3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	TRAC	P01848	142 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	RPL28	P46779	137 aa	Known RBP	3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	KRTAP10-9	P60411	292 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	HERVK_113	P63121	156 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	LRRC75A-AS1	Q8N1F1	130 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	DAND5	Q8N907	189 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	TNFRSF18	Q9Y5U5	241 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	TMEM86B	Q8N661	226 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	LINC01587	Q99440	93 aa		3.1	□□□□□ -1.91
CTSC-208	ENST00000533897	NF1	P21359	2839 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	IGHV3-38	A0A0C4DH36	116 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	CCDC179	H3BU77	68 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897		K7EQD1	137 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	INS	P01308	110 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	C9orf129	Q5T035	196 aa	Known RBP	3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	DAZ4	Q86SG3	579 aa	Known RBP	3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	DUX3	Q96PT4	197 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	DAZ3	Q9NR90	486 aa	Known RBP	3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	ANKRD17	O75179	2603 aa	Known RBP	3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	HERV-K104	P63124	156 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	KHDC1L	Q5JSQ8	128 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	LINC00337	Q8N6G1	96 aa		3.09	□□□□□ -1.91
CTSC-208	ENST00000533897	IGHV3OR16-9	A0A0B4J2B5	98 aa		3.09	□□□□□ -1.92
CTSC-208	ENST00000533897	IMUP	Q9GZP8	106 aa		3.09	□□□□□ -1.92
CTSC-208	ENST00000533897		Q9H8V8	135 aa		3.09	□□□□□ -1.92
CTSC-208	ENST00000533897	ESM1	Q9NQ30	184 aa		3.09	□□□□□ -1.92
CTSC-208	ENST00000533897	BEX4	Q9NWD9	120 aa	Predicted RBP	3.09	□□□□□ -1.92
CTSC-208	ENST00000533897	CENPE	Q02224	2701 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	GAGE5	Q13069	117 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	GAGE6	Q13070	117 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897		Q6ZTI0	123 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	C15orf53	Q8NAA6	179 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	C2orf48	Q96LS8	159 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	SPTBN4	Q9H254	2564 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	SPTA1	P02549	2419 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	NANOS2	P60321	138 aa	Known RBP	3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	HIST2H2BD	Q6DRA6	164 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	TEX29	Q8N6K0	151 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	PEMT	Q9UBM1	199 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	CHD8	Q9HCK8	2581 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	MAPK1IP1L	Q8NDC0	245 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	C16orf95	Q9H693	158 aa		3.08	□□□□□ -1.92
CTSC-208	ENST00000533897	LYST	Q99698	3801 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	TRBV6-4	A0A1B0GX49	114 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897		H7C2G1	150 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	ACYP1	P07311	99 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	FHL2	Q14192	279 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	BBC3	Q96PG8	261 aa	Predicted RBP	3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	ANAPC13	Q9BS18	74 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	C1orf43	Q9BWL3	253 aa		3.07	□□□□□ -1.92
CTSC-208	ENST00000533897	AKAP6	Q13023	2319 aa		3.07	□□□□□ -1.92

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