RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 TRBV7-3A0A075B6L6 115 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 A0A087WWC5 75 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 TRBV6-8A0A0A6YYG3 113 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 MGPP08493 103 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 DNLZQ5SXM8 178 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 ZFP82Q8N141 532 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 LINC00269Q8N2A0 174 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 STOML3Q8TAV4 291 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 HIST1H2BAQ96A08 127 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 FMC1Q96HJ9 113 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 PPDPFQ9H3Y8 114 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 ZFP30Q9Y2G7 519 aa3.81□□□□□ -1.8
SOX6-216ENST00000533658 FAM231BA6NCW3 169 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 TSHBP01222 138 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 CRPP02741 224 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 RPL37AP61513 92 aaKnown RBP3.8□□□□□ -1.8
SOX6-216ENST00000533658 RBX1P62877 108 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 SPANXN1Q5VSR9 72 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 KRTAP26-1Q6PEX3 210 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 BAGE2Q86Y30 109 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 OR10G8Q8NGN5 311 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 FAM218AQ96MZ4 157 aa3.8□□□□□ -1.8
SOX6-216ENST00000533658 ZNF471Q9BX82 626 aaPredicted RBP3.8□□□□□ -1.8
SOX6-216ENST00000533658 IGLV4-60A0A075B6I1 120 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 IGKV3OR2-268A0A0C4DH90 116 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 NKX2-5P52952 324 aaPredicted RBP3.79□□□□□ -1.8
SOX6-216ENST00000533658 TMUB2Q71RG4 321 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 KCNRGQ8N5I3 272 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 RMI2Q96E14 147 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 GNG13Q9P2W3 67 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 KIF25-AS1Q9Y6Z4 181 aa3.79□□□□□ -1.8
SOX6-216ENST00000533658 TRAV26-2A0A0B4J265 109 aa3.78□□□□□ -1.8
SOX6-216ENST00000533658 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
SOX6-216ENST00000533658 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
SOX6-216ENST00000533658 M0QXV9 152 aa3.78□□□□□ -1.8
SOX6-216ENST00000533658 RPL35P42766 123 aaKnown RBP3.78□□□□□ -1.8
SOX6-216ENST00000533658 FOXA3P55318 350 aaPredicted RBP3.78□□□□□ -1.8
SOX6-216ENST00000533658 RAB4BP61018 213 aa3.78□□□□□ -1.8
SOX6-216ENST00000533658 MBD3L1Q8WWY6 194 aa3.78□□□□□ -1.8
SOX6-216ENST00000533658 NKX6-2Q9C056 277 aaPredicted RBP3.78□□□□□ -1.8
SOX6-216ENST00000533658 M0QY20 66 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 CEBPGP53567 150 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 Q0VG73 95 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 ELOBQ15370 118 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 HIGD2BQ4VC39 106 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 CENPWQ5EE01 88 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 C20orf203Q8NBC4 194 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 OR2D3Q8NGH3 330 aa3.77□□□□□ -1.81
SOX6-216ENST00000533658 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
SOX6-216ENST00000533658 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
SOX6-216ENST00000533658 BCL2L11O43521 198 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 PFDN1O60925 122 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 OR5AL1P0C617 328 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 IGLC6P0CF74 106 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 SMIM17P0DL12 118 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 REG3AQ06141 175 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 LYZL1Q6UWQ5 148 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 C9orf163Q8N9P6 203 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 FER1L6-AS1Q8NA97 138 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 RPL39LQ96EH5 51 aaKnown RBP3.76□□□□□ -1.81
SOX6-216ENST00000533658 LINC00526Q96FQ7 95 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 DPH3Q96FX2 82 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 AP1S3Q96PC3 154 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 CHCHD7Q9BUK0 85 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 BATF3Q9NR55 127 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
SOX6-216ENST00000533658 TRBV25-1A0A075B6N4 114 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 IGHV1-24A0A0C4DH33 117 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 K7EN84 100 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 SEC11BP0C7V7 166 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 TAL2Q16559 108 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 MIAQ16674 131 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 RNASE7Q9H1E1 156 aaKnown RBP3.75□□□□□ -1.81
SOX6-216ENST00000533658 VAX2Q9UIW0 290 aa3.75□□□□□ -1.81
SOX6-216ENST00000533658 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 KANTRA0A1W2PQU2 76 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 C19orf71A6NCJ1 209 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 PHOX2AO14813 284 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 NTF3P20783 257 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 COX6A2Q02221 97 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 C14orf177Q52M58 125 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 LINC00242Q5T6M2 205 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 RASL11AQ6T310 242 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 GATD1Q8NB37 220 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 C11orf52Q96A22 123 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 TCEAL7Q9BRU2 100 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 TMEM243Q9BU79 118 aa3.74□□□□□ -1.81
SOX6-216ENST00000533658 MUC2Q02817 5179 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 UMAD1C9J7I0 102 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 E9PLD3 99 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 IFNA1P01562 189 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 P01737 135 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 CXCL1P09341 107 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 GNG4P50150 75 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms