RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 SFTA2Q6UW10 78 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 LINC00322Q6ZN03 302 aaPredicted RBP2.35□□□□□ -2.03
C11orf54-213ENST00000533585 VMO1Q7Z5L0 202 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 LENEPQ9Y5L5 61 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 SHROOM3Q8TF72 1996 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 CASP8AP2Q9UKL3 1982 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 NWD1Q149M9 1564 aa2.35□□□□□ -2.03
C11orf54-213ENST00000533585 MYO18AQ92614 2054 aaKnown RBP2.35□□□□□ -2.03
C11orf54-213ENST00000533585 LTBP2Q14767 1821 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 KANTRA0A1W2PQU2 76 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 CLPSL1A2RUU4 121 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 SPATA45Q537H7 98 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 NMSQ5H8A3 153 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 FAM74A4Q5TZK3 123 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 NDUFA4L2Q9NRX3 87 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 HIGD1BQ9P298 99 aa2.34□□□□□ -2.03
C11orf54-213ENST00000533585 UNC13CQ8NB66 2214 aa2.34□□□□□ -2.04
C11orf54-213ENST00000533585 PARP4Q9UKK3 1724 aaKnown RBP2.34□□□□□ -2.04
C11orf54-213ENST00000533585 RGPD3A6NKT7 1758 aaPredicted RBP2.33□□□□□ -2.04
C11orf54-213ENST00000533585 ZGRF1Q86YA3 2104 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 PTPRDP23468 1912 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 LOC285095A0A1B0GVY8 99 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 PDCD5O14737 125 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 INE1O15225 51 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 BCE1O60756 84 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 PPP1R17O96001 155 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 IL9P15248 144 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 CCL3L1P16619 93 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 WFDC2Q14508 124 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 PMCHL1Q16048 86 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 COX7B2Q8TF08 81 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 PPP1R1CQ8WVI7 109 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 BPESC1Q9GZL8 116 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 PEAK1Q9H792 1746 aa2.33□□□□□ -2.04
C11orf54-213ENST00000533585 SIPA1L3O60292 1781 aaPredicted RBP2.32□□□□□ -2.04
C11orf54-213ENST00000533585 LTN1O94822 1766 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 SCN11AQ9UI33 1791 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 A0A0D9SFI3 127 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 TMEM14DPA8MWL7 114 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 HMGN4O00479 90 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 IGKV1-17P01599 117 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 SNRPFP62306 86 aaKnown RBP2.32□□□□□ -2.04
C11orf54-213ENST00000533585 SPAG11BQ08648 103 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 SPAG11AQ6PDA7 123 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 CDC42SE2Q9NRR3 84 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 SNURFQ9Y675 71 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 C1orf167Q5SNV9 1468 aa2.32□□□□□ -2.04
C11orf54-213ENST00000533585 NRXN2Q9P2S2 1712 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 DOCK2Q92608 1830 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 M0R2N4 97 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 IGLC2P0DOY2 106 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 IGLC3P0DOY3 106 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 KRTAP10-12P60413 245 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 KLKP1Q107X0 134 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 BVES-AS1Q5T3Y7 98 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 TMEM170BQ5T4T1 132 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 Q6ZRN7 208 aaPredicted RBP2.31□□□□□ -2.04
C11orf54-213ENST00000533585 V9GYH0 126 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 MED13Q9UHV7 2174 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 BAZ2BQ9UIF8 2168 aaKnown RBP2.31□□□□□ -2.04
C11orf54-213ENST00000533585 KIAA0100Q14667 2235 aaKnown RBP2.31□□□□□ -2.04
C11orf54-213ENST00000533585 DUOX1Q9NRD9 1551 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 LRP6O75581 1613 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 TJP1Q07157 1748 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 PKD1L3Q7Z443 1732 aa2.31□□□□□ -2.04
C11orf54-213ENST00000533585 TRBV25-1A0A075B6N4 114 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 IGKV3D-7A0A0C4DH55 119 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 DEFB132Q7Z7B7 95 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 FAM223AQ8IWN6 122 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 CICQ96RK0 1608 aaPredicted RBP2.3□□□□□ -2.04
C11orf54-213ENST00000533585 DLEC1Q9Y238 1755 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 RTTNQ86VV8 2226 aa2.3□□□□□ -2.04
C11orf54-213ENST00000533585 ALPK2Q86TB3 2170 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 PSME4Q14997 1843 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 LAMA4Q16363 1823 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 ZNF831Q5JPB2 1677 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 RREB1Q92766 1687 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 ALS2Q96Q42 1657 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 TRGV2A0A075B6R0 118 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 IGKV2-40A0A087WW87 121 aaPredicted RBP2.29□□□□□ -2.04
C11orf54-213ENST00000533585 NBDYA0A0U1RRE5 68 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 IGKV2-29A2NJV5 120 aaPredicted RBP2.29□□□□□ -2.04
C11orf54-213ENST00000533585 ZNF815PA8K554 130 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 F2Z2F3 143 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 H3BUT2 72 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 IGKV2D-40P01614 121 aaPredicted RBP2.29□□□□□ -2.04
C11orf54-213ENST00000533585 FXYD3Q14802 87 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 Q5BKY6 102 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
C11orf54-213ENST00000533585 R4GMQ9 66 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 SPAG17Q6Q759 2223 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 CR1P17927 2039 aa2.29□□□□□ -2.04
C11orf54-213ENST00000533585 ARFGEF2Q9Y6D5 1785 aa2.28□□□□□ -2.04
C11orf54-213ENST00000533585 TIAM2Q8IVF5 1701 aa2.28□□□□□ -2.04
C11orf54-213ENST00000533585 FREM1Q5H8C1 2179 aa2.28□□□□□ -2.04
C11orf54-213ENST00000533585 DOCK10Q96BY6 2186 aa2.28□□□□□ -2.04
C11orf54-213ENST00000533585 LOC110117498A0A087WWA1 95 aa2.28□□□□□ -2.04
C11orf54-213ENST00000533585 CFDP00746 253 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms