RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 GYPEP15421 78 aa15.36■□□□□ 0.05
AP004608.1-202ENST00000533390 COL5A1-AS1Q5SY13 56 aa15.36■□□□□ 0.05
AP004608.1-202ENST00000533390 CELA1Q9UNI1 258 aa15.35■□□□□ 0.05
AP004608.1-202ENST00000533390 CSDC2Q9Y534 153 aaKnown RBP15.35■□□□□ 0.05
AP004608.1-202ENST00000533390 ATP5G1P05496 136 aa15.35■□□□□ 0.05
AP004608.1-202ENST00000533390 H7C423 109 aa15.34■□□□□ 0.05
AP004608.1-202ENST00000533390 SAMD5Q5TGI4 173 aa15.34■□□□□ 0.05
AP004608.1-202ENST00000533390 AMMECR1LQ6DCA0 310 aa15.34■□□□□ 0.05
AP004608.1-202ENST00000533390 HIGD1BQ9P298 99 aa15.34■□□□□ 0.05
AP004608.1-202ENST00000533390 MAST4O15021 2626 aa15.34■□□□□ 0.05
AP004608.1-202ENST00000533390 TEX48A0A1B0GUV7 120 aa15.33■□□□□ 0.05
AP004608.1-202ENST00000533390 PAX4O43316 350 aa15.33■□□□□ 0.05
AP004608.1-202ENST00000533390 BVES-AS1Q5T3Y7 98 aa15.33■□□□□ 0.05
AP004608.1-202ENST00000533390 MAPKAPK5-AS1Q8N8E1 139 aa15.33■□□□□ 0.05
AP004608.1-202ENST00000533390 A0A1B0GV90 55 aa15.33■□□□□ 0.04
AP004608.1-202ENST00000533390 ZNF22P17026 224 aaPredicted RBP15.33■□□□□ 0.04
AP004608.1-202ENST00000533390 ATP6V0E2Q8NHE4 81 aa15.33■□□□□ 0.04
AP004608.1-202ENST00000533390 TRBV6-8A0A0A6YYG3 113 aa15.32■□□□□ 0.04
AP004608.1-202ENST00000533390 MYMXA0A1B0GTQ4 84 aa15.32■□□□□ 0.04
AP004608.1-202ENST00000533390 HSD52Q0P140 79 aa15.32■□□□□ 0.04
AP004608.1-202ENST00000533390 OR5A1Q8NGJ0 315 aa15.32■□□□□ 0.04
AP004608.1-202ENST00000533390 TMEM101Q96IK0 257 aa15.32■□□□□ 0.04
AP004608.1-202ENST00000533390 TINCRA0A1B0GVN0 87 aa15.31■□□□□ 0.04
AP004608.1-202ENST00000533390 TMEM223A0PJW6 202 aa15.31■□□□□ 0.04
AP004608.1-202ENST00000533390 NBEAL2Q6ZNJ1 2754 aa15.29■□□□□ 0.04
AP004608.1-202ENST00000533390 UBE2D1P51668 147 aa15.29■□□□□ 0.04
AP004608.1-202ENST00000533390 RETNQ9HD89 108 aa15.29■□□□□ 0.04
AP004608.1-202ENST00000533390 ZNF815PA8K554 130 aa15.29■□□□□ 0.04
AP004608.1-202ENST00000533390 ZNF25P17030 456 aaPredicted RBP15.29■□□□□ 0.04
AP004608.1-202ENST00000533390 GEMIN7Q9H840 131 aaKnown RBP15.29■□□□□ 0.04
AP004608.1-202ENST00000533390 CHCHD5Q9BSY4 110 aa15.28■□□□□ 0.04
AP004608.1-202ENST00000533390 A0A0J9YY99 117 aa15.27■□□□□ 0.04
AP004608.1-202ENST00000533390 F5H768 121 aa15.27■□□□□ 0.04
AP004608.1-202ENST00000533390 CDC42SE2Q9NRR3 84 aa15.27■□□□□ 0.04
AP004608.1-202ENST00000533390 LEPROTO15243 131 aa15.27■□□□□ 0.03
AP004608.1-202ENST00000533390 LGALS3P17931 250 aaKnown RBP15.27■□□□□ 0.03
AP004608.1-202ENST00000533390 GAGE6Q13070 117 aa15.27■□□□□ 0.03
AP004608.1-202ENST00000533390 VSIG2Q96IQ7 327 aa15.26■□□□□ 0.03
AP004608.1-202ENST00000533390 COL6A5A8TX70 2615 aa15.26■□□□□ 0.03
AP004608.1-202ENST00000533390 J3QQQ9 107 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 HTN3P15516 51 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 SEC11AP67812 179 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 ORAOV1Q8WV07 137 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 CMYA5Q8N3K9 4069 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 TIRAPP58753 221 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 SCGB1D4Q6XE38 83 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 LINC00469Q8N7U9 141 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 PLEKHB2Q96CS7 222 aa15.25■□□□□ 0.03
AP004608.1-202ENST00000533390 TRAV26-1A0A087WT03 109 aa15.24■□□□□ 0.03
AP004608.1-202ENST00000533390 IGHV3-64A0A075B6Q5 118 aa15.23■□□□□ 0.03
AP004608.1-202ENST00000533390 A0A096LPF7 62 aa15.23■□□□□ 0.03
AP004608.1-202ENST00000533390 HERVK_113P63121 156 aa15.23■□□□□ 0.03
AP004608.1-202ENST00000533390 TSPEAR-AS2P59090 65 aa15.23■□□□□ 0.03
AP004608.1-202ENST00000533390 TRAV13-1A0A0B4J241 112 aa15.22■□□□□ 0.03
AP004608.1-202ENST00000533390 H3BRM9 83 aa15.22■□□□□ 0.03
AP004608.1-202ENST00000533390 TAL2Q16559 108 aa15.22■□□□□ 0.03
AP004608.1-202ENST00000533390 FAM19A3Q7Z5A8 133 aa15.22■□□□□ 0.03
AP004608.1-202ENST00000533390 C11orf68Q9H3H3 251 aaKnown RBP15.22■□□□□ 0.03
AP004608.1-202ENST00000533390 GCSHP23434 173 aa15.2■□□□□ 0.02
AP004608.1-202ENST00000533390 C12orf74Q32Q52 190 aa15.2■□□□□ 0.02
AP004608.1-202ENST00000533390 A6NDN8 102 aa15.2■□□□□ 0.02
AP004608.1-202ENST00000533390 MRPL23Q16540 153 aaKnown RBP15.2■□□□□ 0.02
AP004608.1-202ENST00000533390 LINC00242Q5T6M2 205 aa15.2■□□□□ 0.02
AP004608.1-202ENST00000533390 HIST1H4GQ99525 98 aa15.2■□□□□ 0.02
AP004608.1-202ENST00000533390 IGLV5-45A0A087WSX0 123 aa15.19■□□□□ 0.02
AP004608.1-202ENST00000533390 IGHV1-58A0A0C4DH39 117 aa15.19■□□□□ 0.02
AP004608.1-202ENST00000533390 IGHV3-30-3P0DP02 117 aa15.19■□□□□ 0.02
AP004608.1-202ENST00000533390 ICOSQ9Y6W8 199 aa15.19■□□□□ 0.02
AP004608.1-202ENST00000533390 CEND1Q8N111 149 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 CDKN2A-AS1Q9UH64 79 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 PKD1L1Q8TDX9 2849 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 TRAV8-3A0A0A6YYJ7 113 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 TMEM262E9PQX1 116 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 SPINK8P0C7L1 97 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
AP004608.1-202ENST00000533390 IGLV4-60A0A075B6I1 120 aa15.17■□□□□ 0.02
AP004608.1-202ENST00000533390 PRB2P02812 416 aaPredicted RBP15.17■□□□□ 0.02
AP004608.1-202ENST00000533390 COX6A2Q02221 97 aa15.17■□□□□ 0.02
AP004608.1-202ENST00000533390 MDFIQ99750 246 aa15.17■□□□□ 0.02
AP004608.1-202ENST00000533390 TM2D2Q9BX73 214 aa15.16■□□□□ 0.02
AP004608.1-202ENST00000533390 PTTG1IPP53801 180 aa15.15■□□□□ 0.02
AP004608.1-202ENST00000533390 A0A0J9YWU9 116 aa15.14■□□□□ 0.01
AP004608.1-202ENST00000533390 A0A1B0GUV1 79 aa15.14■□□□□ 0.01
AP004608.1-202ENST00000533390 FXYD2P54710 66 aa15.14■□□□□ 0.01
AP004608.1-202ENST00000533390 SRSF9Q13242 221 aaKnown RBP eCLIP15.14■□□□□ 0.01
AP004608.1-202ENST00000533390 DEFB121Q5J5C9 76 aa15.14■□□□□ 0.01
AP004608.1-202ENST00000533390 SPATA25Q9BR10 227 aa15.14■□□□□ 0.01
AP004608.1-202ENST00000533390 IGKV3OR2-268A0A0C4DH90 116 aa15.13■□□□□ 0.01
AP004608.1-202ENST00000533390 K7EIL1 84 aa15.13■□□□□ 0.01
AP004608.1-202ENST00000533390 TAX1BP3O14907 124 aa15.12■□□□□ 0.01
AP004608.1-202ENST00000533390 COX11Q9Y6N1 276 aa15.12■□□□□ 0.01
AP004608.1-202ENST00000533390 RBX1P62877 108 aa15.12■□□□□ 0.01
AP004608.1-202ENST00000533390 KPRPQ5T749 579 aaPredicted RBP15.12■□□□□ 0.01
AP004608.1-202ENST00000533390 Q6ZTC4 211 aa15.11■□□□□ 0.01
AP004608.1-202ENST00000533390 Q6ZVH6 145 aa15.1■□□□□ 0.01
AP004608.1-202ENST00000533390 SPANXB1Q9NS25 103 aaPredicted RBP15.1■□□□□ 0.01
AP004608.1-202ENST00000533390 NDUFA12Q9UI09 145 aa15.1■□□□□ 0.01
AP004608.1-202ENST00000533390 DNAH3Q8TD57 4116 aa15.1■□□□□ 0.01
AP004608.1-202ENST00000533390 H3BNG1 76 aa15.1■□□□□ 0.01
AP004608.1-202ENST00000533390 LURAP1LQ8IV03 231 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms