RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 HILS1P60008 231 aa5.25□□□□□ -1.57
TGFBR3-210ENST00000533089 PATE2Q6UY27 113 aa5.25□□□□□ -1.57
TGFBR3-210ENST00000533089 TRBV10-1A0A0K0K1A3 114 aa5.25□□□□□ -1.57
TGFBR3-210ENST00000533089 PCDH15Q96QU1 1955 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 ZNF843Q8N446 348 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 C4orf3Q8WVX3 66 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 ZGRF1Q86YA3 2104 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 NDUFA1O15239 70 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 C5orf56Q8N8D9 126 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 CELA1Q9UNI1 258 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 KIF26AQ9ULI4 1882 aaPredicted RBP5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 FAM222AQ5U5X8 452 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 KLK12Q9UKR0 248 aa5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 SPTAN1Q13813 2472 aaKnown RBP5.24□□□□□ -1.57
TGFBR3-210ENST00000533089 TANC2Q9HCD6 1990 aa5.23□□□□□ -1.57
TGFBR3-210ENST00000533089 DNAJC9-AS1A6NH13 148 aa5.23□□□□□ -1.57
TGFBR3-210ENST00000533089 C11orf45Q8TAV5 145 aa5.23□□□□□ -1.57
TGFBR3-210ENST00000533089 LINC00308Q8TCZ7 52 aa5.23□□□□□ -1.57
TGFBR3-210ENST00000533089 SMCPP49901 116 aaPredicted RBP5.23□□□□□ -1.57
TGFBR3-210ENST00000533089 CCKP06307 115 aa5.23□□□□□ -1.57
TGFBR3-210ENST00000533089 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.22□□□□□ -1.578e-8■■■■□ 21.1
TGFBR3-210ENST00000533089 ACACBO00763 2458 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 BRI3O95415 125 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 C11orf53Q8IXP5 236 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 MED12LQ86YW9 2145 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 INAFM1C9JVW0 142 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 TMEM254Q8TBM7 123 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 C1orf158Q8N1D5 194 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 Q8N9W7 124 aa5.22□□□□□ -1.57
TGFBR3-210ENST00000533089 DENND4CQ5VZ89 1909 aa5.21□□□□□ -1.57
TGFBR3-210ENST00000533089 WISP2O76076 250 aa5.21□□□□□ -1.57
TGFBR3-210ENST00000533089 CRYGDP07320 174 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 B9D2Q9BPU9 175 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 IGKV1-17P01599 117 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 NHLRC4P0CG21 123 aaPredicted RBP5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 DIRC1Q969H9 104 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 LENEPQ9Y5L5 61 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 U3KQK5 164 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 IGLV11-55A0A075B6I3 123 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 I3L2K1 104 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 PRO0461Q9UI25 63 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 FAM208BQ5VWN6 2430 aa5.21□□□□□ -1.58
TGFBR3-210ENST00000533089 HIGD2AQ9BW72 106 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 C3orf84H3BNL1 204 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 IGLV3-1P01715 115 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 FGF23Q9GZV9 251 aaPredicted RBP5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 K7EIM0 57 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 DEFB1P60022 68 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 KRTAP27-1Q3LI81 207 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 NOTCH3Q9UM47 2321 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 IGKV1D-37A0A075B6S9 117 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 Q8N3U1 123 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 LINC00474Q9P2X8 69 aa5.2□□□□□ -1.58
TGFBR3-210ENST00000533089 IGLV9-49A0A0B4J1Y8 123 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 C19orf84I3L1E1 186 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 ZNF73O43830 326 aaPredicted RBP5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 NRACQ8N912 160 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 HCG22E2RYF7 251 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 LIMD2Q9BT23 127 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 EML6Q6ZMW3 1958 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 Q6ZSV7 163 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 WFDC13Q8IUB5 93 aa5.19□□□□□ -1.58
TGFBR3-210ENST00000533089 C14orf177Q52M58 125 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 C20orf203Q8NBC4 194 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 PRAC2D3DTV9 90 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 NACAE9PAV3 2078 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 TRBV6-1A0A0K0K1D8 114 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 SPAG11AQ6PDA7 123 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 Q8N7P7 452 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 EXPH5Q8NEV8 1989 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 IGF2RP11717 2491 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 COX7BP24311 80 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 ZNF295-AS1Q8N0V1 137 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 LINC00846Q9NV44 126 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 PLXNB3Q9ULL4 1909 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 FHL2Q14192 279 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 PCNX1Q96RV3 2341 aa5.18□□□□□ -1.58
TGFBR3-210ENST00000533089 SBSPONQ8IVN8 264 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 COL5A1P20908 1838 aaPredicted RBP5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 MAP6D1Q9H9H5 199 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 PRO0255Q9UI72 69 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 IGLV2-11P01706 119 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 Q6ZSR3 168 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 RNF185Q96GF1 192 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 K7EMT4 169 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 Q8N9L7 120 aa5.17□□□□□ -1.58
TGFBR3-210ENST00000533089 DEFB131BA0A096LNP1 70 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 PTPRQQ9UMZ3 2332 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 SPINK1P00995 79 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 ZNF80P51504 273 aaPredicted RBP5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 ZNF106Q9H2Y7 1883 aaKnown RBP5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 A6NDX4 124 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 UNQ9165/PRO28630Q6UXU0 137 aa5.16□□□□□ -1.58
TGFBR3-210ENST00000533089 ADAMTS9Q9P2N4 1935 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms