RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 BORCS7-ASMTA0A0B4J1R7 106 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 TRAV8-4A0A0B4J246 113 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 IGHV1-24A0A0C4DH33 117 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 A0A0J9YXV3 536 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 C19orf71A6NCJ1 209 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 P01737 135 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 PRSS2P07478 247 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 RAB5CP51148 216 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 NKX2-5P52952 324 aaPredicted RBP2.8□□□□□ -1.96
CTNND1-226ENST00000530720 COX6A2Q02221 97 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 VAMP3Q15836 100 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 TMEM97Q5BJF2 176 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 AKR1C8PQ5T2L2 129 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 C10orf25Q5T742 122 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 Q6ZVQ6 151 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 BAGE2Q86Y30 109 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 MBD3L1Q8WWY6 194 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 PGLYRP4Q96LB8 373 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 AP1S3Q96PC3 154 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 MED28Q9H204 178 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 MUC2Q02817 5179 aa2.8□□□□□ -1.96
CTNND1-226ENST00000530720 TRBV20OR9-2A0A075B6H5 130 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 GVQW2A0A096LPI5 108 aaPredicted RBP2.79□□□□□ -1.96
CTNND1-226ENST00000530720 A0A1B0GV50 99 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 SMLR1H3BR10 107 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 ARPC5O15511 151 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 RPL35P42766 123 aaKnown RBP2.79□□□□□ -1.96
CTNND1-226ENST00000530720 CCL20P78556 96 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 FAM74A3Q4VXF1 159 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 SPANXN1Q5VSR9 72 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 STOML3Q8TAV4 291 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 C11orf52Q96A22 123 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 TMEM243Q9BU79 118 aa2.79□□□□□ -1.96
CTNND1-226ENST00000530720 CSDC2Q9Y534 153 aaKnown RBP2.79□□□□□ -1.96
CTNND1-226ENST00000530720 IGLV5-45A0A087WSX0 123 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.78□□□□□ -1.96
CTNND1-226ENST00000530720 IGKV2-24A0A0C4DH68 120 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 NDUFS6O75380 124 aaKnown RBP2.78□□□□□ -1.96
CTNND1-226ENST00000530720 HSBP1O75506 76 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 MGPP08493 103 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 CTRLP40313 264 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 RPS10P46783 165 aaKnown RBP2.78□□□□□ -1.96
CTNND1-226ENST00000530720 RPL24P83731 157 aaKnown RBP2.78□□□□□ -1.96
CTNND1-226ENST00000530720 ZNF345Q14585 488 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 HIGD2BQ4VC39 106 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 CENPWQ5EE01 88 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 RASL11AQ6T310 242 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 TMUB2Q71RG4 321 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 KCNRGQ8N5I3 272 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 STPG4Q8N801 248 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 FAM213BQ8TBF2 198 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 SFT2D1Q8WV19 159 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 URB1-AS1Q96HZ7 61 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 CNFNQ9BYD5 112 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 NIT2Q9NQR4 276 aa2.78□□□□□ -1.96
CTNND1-226ENST00000530720 TRAV26-2A0A0B4J265 109 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 RAB19A4D1S5 217 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 FAM231BA6NCW3 169 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 UMAD1C9J7I0 102 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 H7C1H1 209 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 GAS8-AS1O95177 125 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 SMIM17P0DL12 118 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 NTF3P20783 257 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 CACNG7P62955 275 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 SPINK6Q6UWN8 80 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 LYZL1Q6UWQ5 148 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 C9orf62Q8N4C0 152 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.77□□□□□ -1.97
CTNND1-226ENST00000530720 GATD1Q8NB37 220 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 OR2D3Q8NGH3 330 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 LYPD6BQ8NI32 183 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 C7orf33Q8WU49 177 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 GTSF1Q8WW33 167 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 CHCHD10Q8WYQ3 142 aaPredicted RBP2.77□□□□□ -1.97
CTNND1-226ENST00000530720 RPL39LQ96EH5 51 aaKnown RBP2.77□□□□□ -1.97
CTNND1-226ENST00000530720 LINC00526Q96FQ7 95 aa2.77□□□□□ -1.97
CTNND1-226ENST00000530720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.76□□□□□ -1.97
CTNND1-226ENST00000530720 IGLV9-49A0A0B4J1Y8 123 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 TRAV1-1A0A0B4J248 108 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 IGKV3OR2-268A0A0C4DH90 116 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 IGKV2-29A2NJV5 120 aaPredicted RBP2.76□□□□□ -1.97
CTNND1-226ENST00000530720 BCL2L11O43521 198 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 PFDN1O60925 122 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 FGF6P10767 208 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 ESDP10768 282 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 SULT1A2P50226 295 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 FOXA3P55318 350 aaPredicted RBP2.76□□□□□ -1.97
CTNND1-226ENST00000530720 LINC00469Q8N7U9 141 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 DPH3Q96FX2 82 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 DPH3P1Q9H4G8 78 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 CBY1Q9Y3M2 126 aa2.76□□□□□ -1.97
CTNND1-226ENST00000530720 LINC00959A0A1B0GUT2 108 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 HMSDA8MTL9 139 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 F2Z2F3 143 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 K7EN84 100 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 UBE2L6O14933 153 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 ATP5LO75964 103 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms