RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 RBMY1CP0DJD4 496 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 CD28P10747 220 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 RBMY1FQ15415 496 aaKnown RBP8.48□□□□□ -1.05
USP35-207ENST00000530546 Q1RN00 199 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 CUBNO60494 3623 aa8.48□□□□□ -1.05
USP35-207ENST00000530546 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
USP35-207ENST00000530546 KRTAP1-1Q07627 177 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 ZNF56Q15929 161 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 C2orf82Q6UX34 121 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
USP35-207ENST00000530546 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
USP35-207ENST00000530546 RBMY1BA6NDE4 496 aaKnown RBP8.46□□□□□ -1.05
USP35-207ENST00000530546 RBMY1EA6NEQ0 496 aaKnown RBP8.46□□□□□ -1.05
USP35-207ENST00000530546 IGIPA6NJ69 53 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 RBMY1DP0C7P1 496 aaKnown RBP8.46□□□□□ -1.05
USP35-207ENST00000530546 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 TIMM17AQ99595 171 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 NOTCH2Q04721 2471 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 UNC79Q9P2D8 2635 aa8.46□□□□□ -1.05
USP35-207ENST00000530546 TSHBP01222 138 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 ZNF876PQ49A33 203 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
USP35-207ENST00000530546 IGHV3-73A0A0B4J1V6 119 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 H7C2G1 150 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 SMR3AQ99954 134 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 ZNF256Q9Y2P7 627 aaPredicted RBP8.45□□□□□ -1.06
USP35-207ENST00000530546 HECTD1Q9ULT8 2610 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 LEPROTO15243 131 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 NDUFA7O95182 113 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 TP53TG1Q9Y2A0 90 aa8.45□□□□□ -1.06
USP35-207ENST00000530546 H7C423 109 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 TRIAP1O43715 76 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 ATP5G1P05496 136 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 ACYP1P07311 99 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 A0A1B0GX51 115 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 CCL24O00175 119 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 LINC00694P0DN24 101 aa8.44□□□□□ -1.06
USP35-207ENST00000530546 TRGV11A0A075B6L2 103 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 UQCRQO14949 82 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 COX6CP09669 75 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 C9orf153Q5TBE3 101 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 POM121L12Q8N7R1 296 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 J3KT08 172 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 EMP1P54849 157 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 FAM236AA0A1B0GUQ0 79 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 FAM236BA0A1B0GV22 79 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 LINC01006Q8NI28 216 aa8.43□□□□□ -1.06
USP35-207ENST00000530546 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
USP35-207ENST00000530546 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
USP35-207ENST00000530546 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
USP35-207ENST00000530546 ICOSQ9Y6W8 199 aa8.42□□□□□ -1.06
USP35-207ENST00000530546 IGHV3OR16-12A0A075B7B8 117 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 VCYO14598 125 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
USP35-207ENST00000530546 SMIM9A6NGZ8 99 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 M0QY20 66 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 PROK1P58294 105 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 C3orf56Q8N813 242 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
USP35-207ENST00000530546 ANK3Q12955 4377 aaKnown RBP8.4□□□□□ -1.06
USP35-207ENST00000530546 F8WDY8 70 aa8.4□□□□□ -1.06
USP35-207ENST00000530546 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
USP35-207ENST00000530546 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.06
USP35-207ENST00000530546 HIVEP2P31629 2446 aa8.4□□□□□ -1.07
USP35-207ENST00000530546 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.07
USP35-207ENST00000530546 HERVK_113P63121 156 aa8.4□□□□□ -1.07
USP35-207ENST00000530546 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.07
USP35-207ENST00000530546 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
USP35-207ENST00000530546 LST1O00453 97 aa8.39□□□□□ -1.07
USP35-207ENST00000530546 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
USP35-207ENST00000530546 JMJD1CQ15652 2540 aa8.38□□□□□ -1.07
USP35-207ENST00000530546 STHQ8IWL8 128 aa8.38□□□□□ -1.07
USP35-207ENST00000530546 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
USP35-207ENST00000530546 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 A8MTW9 85 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 INSP01308 110 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 CXCL5P42830 114 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
USP35-207ENST00000530546 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
USP35-207ENST00000530546 OR13C6PQ8NH95 151 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 Q9UF83 564 aa8.37□□□□□ -1.07
USP35-207ENST00000530546 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
USP35-207ENST00000530546 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
USP35-207ENST00000530546 WFDC10AQ9H1F0 79 aa8.36□□□□□ -1.07
USP35-207ENST00000530546 Q6ZSN1 163 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 CRYGAP11844 174 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 COX7CP15954 63 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
USP35-207ENST00000530546 LITAFQ99732 161 aa8.35□□□□□ -1.07
USP35-207ENST00000530546 C16orf95Q9H693 158 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms